Methylomonas sp. DH-1: AYM39_09370
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Entry
AYM39_09370 CDS
T04396
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00020
Citrate cycle (TCA cycle)
mdh00190
Oxidative phosphorylation
mdh00650
Butanoate metabolism
mdh01100
Metabolic pathways
mdh01110
Biosynthesis of secondary metabolites
mdh01120
Microbial metabolism in diverse environments
mdh01200
Carbon metabolism
Module
mdh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mdh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mdh_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AYM39_09370
00650 Butanoate metabolism
AYM39_09370
09102 Energy metabolism
00190 Oxidative phosphorylation
AYM39_09370
Enzymes [BR:
mdh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AYM39_09370
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Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
GIDA
Motif
Other DBs
NCBI-ProteinID:
ANE55362
UniProt:
A0A172U840
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Position
2055140..2056924
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AA seq
594 aa
AA seq
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MASAYNIIEHQHDVVVVGAGGAGLRATFGMVEKGLKTACISKVFPTRSHTVAAQGGISAA
LGNMGEDDWRFHMYDTVKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTAEGKIYQ
RAFGGMSTHYGKAQAQRTCAAADVTGHAILHTLYQQALKHNAEFFVEYIALDLIMEDGEC
RGVLAWCLDDGSIHLFRGHQTVLATGGYGRAFFSCTSAHTVTGDGNGMVLRAGLPLQDME
FVQFHPTGIYGSGCLITEGARGEGGYLTNSEGERFMPNYAPNAKDLASRDVVSRAITMEV
NAGRGVGPKKDHALLHLEHLDPAIIHERLPGIAETARIFAGVDVTKQPIPVIPTVHYNMG
GIPTNYKAEVVTLKDGDPDTVVPGLMAIGETACVSVHGANRLGSNSLLDLVVFGRAAAIR
ANELIKPGMAHKPLAKDACDKALSRFDTIRHASGSRKTAEIRLDMQTTMQAKAAVFRTAE
TLQEGVARIGEIAASFSDVNVGDKSLIWNTDLVETLELDNLLGQAQVTITAAANRQESRG
GHAREDFPKRDDKNWLKHTLTWRQDNQVKIDYRPVHLYTLTDEVEVVAPKERVY
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcatataacatcattgaacaccagcacgacgttgtggtggttggcgccggc
ggagccggtttgcgggcaacttttggaatggtggagaaggggctgaaaaccgcttgtatc
agcaaggtgtttccgacccgcagccatacagtggcagcgcagggtggaattagcgcggca
ttgggcaacatgggcgaagacgattggcggtttcatatgtacgacaccgtcaagggttcc
gattggcttggcgaccaggatgcgatcgaatatatgtgccgcgaggcgattccggccatc
atcgagctggagcactacggcgtgccgttttctaggaccgcggaaggcaaaatttaccag
cgcgcgttcggcggcatgtcgactcactacggtaaagcccaggcgcaacgtacttgcgcg
gcggccgacgtcaccggccacgccattctgcacactctttaccaacaggctttaaagcac
aacgccgagttcttcgtcgaatacatcgcgctggatctgatcatggaagacggcgaatgc
cgcggcgtgttggcctggtgtctggacgacggttccattcatctgttccgtggccaccag
accgtactggcgaccggcggttacggccgagcgtttttctcctgcacctcggcgcacact
gtgaccggcgacggtaacggtatggttttgcgggccggtttaccgttgcaggacatggag
ttcgtgcaattccatccgaccggcatctacggttccggctgcttgattacggaaggcgcc
aggggcgagggcggttacctgaccaattccgaaggcgaacgtttcatgcccaattacgcg
cccaacgcgaaggacttggcgtcgcgcgacgtggtcagtcgggctatcacgatggaagtt
aacgccggccgcggcgtcggtccgaaaaaagaccatgccttgctgcatttggaacatctc
gatccggcgatcatccacgaacgcctgcccggtatcgccgaaaccgcgcgcatctttgcc
ggcgtcgacgttaccaagcagccaatcccggtgattccgaccgtgcactacaacatgggc
gggataccgaccaactacaaagccgaagttgtgaccctgaaggacggcgatcccgacacc
gtggtgccgggcttgatggccatcggcgaaaccgcttgcgtttcggtccacggcgccaac
cggttgggatccaactcgttgctcgacttggtggtattcggccgggctgctgctatccgt
gccaacgaactgatcaaaccgggcatggcgcataagccgctggctaaggatgcttgcgat
aaagccctgtcccgtttcgataccatccgccatgcaagcggcagccgtaagaccgctgaa
atccgtttggatatgcaaaccacgatgcaggccaaagcggctgtgttccgcacagcggaa
accttacaagaaggcgtagcacgcataggcgagattgccgcgtcgtttagcgatgtcaac
gtcggggataaatcgctgatttggaacaccgatttggtcgaaaccctggagctggataat
ctactgggccaagctcaggttacgattaccgccgctgccaaccgccaggagagccgcggc
ggccatgctcgagaagattttccgaaacgcgacgacaaaaactggctgaaacatacattg
acgtggcggcaggataatcaggtgaaaatcgattatcgtcccgtccatttatatacgctg
accgacgaagtggaagtcgtggcgcctaaagagagggtctactaa
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