KEGG   Methylomonas sp. DH-1: AYM39_13005
Entry
AYM39_13005       CDS       T04396                                 
Name
(GenBank) SPO1 DNA polymerase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
mdh  Methylomonas sp. DH-1
Pathway
mdh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mdh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AYM39_13005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdh03400]
    AYM39_13005
Enzymes [BR:mdh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     AYM39_13005
DNA repair and recombination proteins [BR:mdh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AYM39_13005
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ANE56004
UniProt: A0A172UA09
LinkDB
Position
complement(2923988..2924635)
AA seq 215 aa
MLDSNCFNQDCRDCQRLAGFLDNVKLKYPDYHAQPVAPFGDPAAQLLVVGLAPGMHGANA
SGRPFTGDYAGLLLYQALYDFGFSNQADSAALDDGLVLNNCRITNAVKCLPPQNKPTGDE
IKRCNRYLAAEIDTLPDNAVILALGNIAHQAVLRAYGLKSSAAKFGHHQCFQLPGGNVLV
SSYHCSRYNVQTKRLSMAMLADVFATIRSLLAGRD
NT seq 648 nt   +upstreamnt  +downstreamnt
atgttggattcgaattgctttaaccaggattgtcgggattgccagcgtttggcaggattt
ctcgataacgtcaagcttaaataccctgattaccacgcccagccggttgcgccgttcggc
gatcctgcagcgcagttgctggtggtcggtctggcgccgggtatgcacggcgctaatgcc
agcggccggcctttcacgggagattatgccgggctgctgctgtatcaagccttgtacgat
ttcggtttcagtaatcaagcggattcggccgctctagacgatggcttggttttgaacaat
tgccggatcaccaatgcggtgaaatgtctgccgccgcaaaataaaccgaccggcgacgaa
attaaacgctgcaatcgttatctggccgccgagatcgatactttaccggacaatgccgtc
attttggctttgggtaatatcgcccaccaagccgtgttgcgcgcttatggcttgaaaagt
agtgccgccaaattcggccatcaccagtgttttcagttacccggcggcaatgttttggtc
agctcctaccattgcagccgctacaatgtgcagacgaagcgtttgagcatggcgatgctg
gccgacgtatttgcgaccattcgatctttgttggcgggccgtgactga

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