Methylomonas sp. DH-1: AYM39_19060
Help
Entry
AYM39_19060 CDS
T04396
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mdh
Methylomonas sp. DH-1
Pathway
mdh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AYM39_19060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdh01007
]
AYM39_19060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdh03016
]
AYM39_19060
Enzymes [BR:
mdh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
AYM39_19060
Amino acid related enzymes [BR:
mdh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
AYM39_19060
Transfer RNA biogenesis [BR:
mdh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AYM39_19060
Prokaryotic type
AYM39_19060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ANE57066
UniProt:
A0A172UCM3
LinkDB
All DBs
Position
complement(4281022..4283829)
Genome browser
AA seq
935 aa
AA seq
DB search
MDKTYSPHAIEQRWYQIWEQSGYFAANREGASYCIMIPPPNVTGSLHMGHAFQDTIMDAL
TRYHRMKGCNALWQPGTDHAGIATQMVVERIINADGKTRHDYGRDAFIEKVWEWKEQSGG
TITRQLRRMGSSLDWEKERFTMDDGMSAAVQEVFIKLYEEGLIYRGKRLVNWDPVLHTAV
SDLEVLSEEEAGSMWHMRYPLSNGTGHLVVATTRPETMLGDAAVAVHPDDERYKHLIGEL
VELPLTGRLIPIIADDYVDPEFGTGCVKITPAHDFNDYEVWGRHKQMNVIADQPHGGLIN
IFTVDAAIRANDDGFEIIPQAYIGLDRFEARKRIVSDLEAQGLLEKIADHKLMVPRGDRT
GAVIEPFLTNQWYVKIAPLAKPAIEAVETGAIKFVPDNWKNTYFEWMRNIQDWCISRQIW
WGHRIPAWYDDKGNTYVAHSEQEVREQHGLAADYPLHQDEDVLDTWFSSALWPFSTLGWP
DKTPELAAHYPTSVLVTGFDIIFFWVARMIMMGLKFQGEVPFKEVYIHGLVRDAEGQKMS
KSKGNVLDPIDIIDGIALETLVEKRVSGMMQPHLAKKIEQATRKQFPDGIPSYGTDALRF
TFASLASTGRDIRFDLQRTEGYRNFCNKLWNAARYVLMNTEGQDNGVDCAECSYSPADLW
ILSRLNRTIADTSSAIDSYRFDLAAQAIYEFTWNEYCDWYLELAKISLQSDDALLQRGTR
QTLLRVLETVLRLAHPIMPFITEEIWQRVGPLAGVTAATIMLQPYPASDASAIDAAAETQ
VKWAMDFILGIRRIRGEMNIAPGKPLNVLLQNGSANDQANLKQLESYLLKLGRLESITWL
NAGDDAPESAIALVGDMKILIPMAGLIDKDAELARLDKEIQRIEKELPRIEGKLGNAAFV
DKAPADVIAKEREKLAGLQSSLANLQEQYAKIKAL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacctattccccgcacgctatcgaacaacgctggtatcaaatttgggaacaa
agcggctacttcgccgccaaccgcgaaggcgcatcgtattgcatcatgattccgccgccc
aacgtcactggcagcttgcatatggggcatgcgtttcaggacaccatcatggatgcgttg
acccgctaccaccggatgaagggttgcaatgcgttgtggcagccgggcaccgaccatgcc
ggcatcgccacacaaatggtggtggagcgcatcatcaacgccgacggcaagacccgccac
gactacggccgcgacgccttcatcgaaaaagtctgggaatggaaggaacagtccggcggc
accatcacccgccagttgcggcgcatgggttcgtcgttggattgggagaaagaacgcttc
acgatggacgacggtatgtccgccgccgtccaggaagtgttcatcaaactctacgaggaa
ggcctgatctaccgcggcaagcgtttggtgaactgggacccggtattgcacaccgccgtc
tccgacttggaagtgttgtccgaggaagaagccggctcgatgtggcatatgcgttatccg
ctgtccaacggcaccggtcatttggtcgttgcgacgacacggccggaaaccatgctcggc
gacgcggcggtggcggtgcatccggacgacgaacgctataaacacctgatcggcgaactg
gtggagttgccgctgaccggccgcttgattccgatcatcgccgacgactacgtcgatccc
gaattcggtaccggctgcgtcaaaatcacgccggcccacgactttaacgactacgaagtc
tggggtcgccataaacaaatgaacgtgatcgccgaccagccccacggcggcttgatcaac
atcttcaccgtcgatgcggcgatacgcgccaacgacgacggttttgaaatcattccacaa
gcctatattggcctggaccgcttcgaggcccgcaaacgcatcgtctccgacctggaagct
cagggcctgctggaaaaaatcgccgaccataaattgatggtgccgcgcggcgaccgcacc
ggcgcagtgatcgagccgtttttgaccaaccagtggtacgtcaaaatcgcgccgttggcg
aagccggccatcgaagccgtggaaaccggcgcgatcaagttcgtgccggacaactggaag
aacacctatttcgagtggatgcgcaacatccaggattggtgcatctcccggcaaatctgg
tggggccaccgcatcccggcctggtacgacgacaagggcaacacctacgtcgcccattcc
gagcaggaagtgcgcgagcaacacggattggctgccgactatccgctgcatcaagacgaa
gacgtgctggatacttggttctcgtcggcgctgtggccgttctcgacgctgggctggcct
gacaaaaccccggaactggccgcgcattacccgaccagcgtgttggtcaccggcttcgac
atcatcttcttctgggtcgcccggatgatcatgatgggcctgaaattccagggcgaggtg
ccgttcaaagaagtttacatccacggcctggtgcgcgacgccgagggccaaaaaatgtcc
aaatccaagggcaacgtgctcgacccgatcgacatcatcgacggcatagcactggaaaca
ctggtcgaaaaacgcgtgtccggtatgatgcagccgcacttggccaagaaaatcgaacag
gctacccgcaagcaattcccggacggcattccgtcctacggcaccgacgcactgcgtttt
acctttgcctcgctagcgtcgaccggccgcgacattcgcttcgatttgcagcgcaccgaa
ggctaccgcaacttctgcaacaaattgtggaacgcggcgcgctacgtgctgatgaacacc
gagggccaagacaacggcgtcgattgcgccgaatgtagctatagcccggccgacctgtgg
attttgtccagactgaaccgcaccatcgccgataccagcagcgcgatcgacagctaccgc
ttcgatttggccgcgcaggcgatctacgaattcacctggaacgaatactgcgactggtat
ctggagctggcgaaaatttcgctgcaaagcgacgacgccttgttgcaacgcggcacccgc
caaaccttgttgcgggtgctggaaaccgtactgagactggcgcatccgatcatgccgttc
atcaccgaggaaatctggcaacgtgtcggaccgttggccggcgtgacggcggcgaccatc
atgttgcagccttacccggcaagcgacgcaagcgccatcgacgccgccgccgaaacgcaa
gtgaagtgggcgatggatttcatcctcggcatccgccggattcgcggcgaaatgaacatc
gcgccgggcaagccattgaacgtgttgctgcaaaacggctctgccaatgaccaagccaat
ctcaaacagctggaaagctatttgctgaaactgggccggctggaaagcattacctggctg
aatgccggcgatgacgcgccggaatcggcgattgcgctggtcggcgacatgaaaatccta
atcccgatggccggcttgatcgacaaggacgccgaactggcgcggctggacaaggaaatt
caacgcatcgaaaaagagctgccgcgcatcgaaggcaagctcggcaatgccgccttcgtc
gacaaagctccggccgacgttatcgccaaagaacgggaaaaactggccgggctgcagtcg
tcgctggccaatctgcaggaacagtacgccaaaatcaaagccttgtaa
DBGET
integrated database retrieval system
