Methylorubrum extorquens DM4: METDI3130
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Entry
METDI3130 CDS
T00947
Symbol
atoE
Name
(GenBank) short-chain fatty acid transporter (scFAT family)
KO
K02106
short-chain fatty acids transporter
Organism
mdi
Methylorubrum extorquens DM4
Pathway
mdi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
METDI3130 (atoE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCFA_trans
DcuC
Motif
Other DBs
NCBI-ProteinID:
CAX24782
UniProt:
C7CLF3
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All DBs
Position
3047367..3048806
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AA seq
479 aa
AA seq
DB search
MDAPPEPRTRTEERAMARLALRFTDWAEKWFPDAFVFVAIAVVIVASAALINGAPVQAVS
KSFGDGFWSLIPFTMQMVFVTIGGYVVATSAPVQALIDRMALVPKTGRGAIGYVALATML
SSLLSWGLSLIFGGLLARALARRTELRMDYRAAGAAAYLGLGATWAMGLSSSAAQLQANP
KSLPPGLLPITGVIPFSETIFLWQSILIAAILVVMSALIALASAPGRETAVTAQDLGVDV
SKQEDSIDPPKQPGEWLEHAPVLTILIGLLAAGWLIQEFARQDWMVAISNLNTYNFLFLM
VGFVLHWRPKRFLAALSKAVPATAGILIQFPFYAAIAAILTGAKNAAGHSLSDVIAHAFV
AMNTQGSFPLAMGVYSALLGFFIPSGGGKWLLEAPYVMQAANELKVHLGWAVQVYNAAEA
LPNLINPFFMLPLLGILGLKARDIVGFSFLQLIVHLPVVLFLLWALAFTLEYHPPVLPG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcccccagagccccgcacgcggaccgaggagcgggccatggcccgtctcgca
ctccgcttcaccgattgggcggagaagtggtttcccgacgccttcgtgttcgtggccatc
gccgtcgtcatcgtggcatccgccgcgctcatcaacggcgcgccggtccaggcggtgtcg
aagagcttcggcgacgggttctggagcctgatccccttcaccatgcagatggtcttcgtc
accatcggcggctacgtggtggcgacctccgccccggtgcaagccctgatcgaccggatg
gcgctggtgccaaagaccgggcgcggcgccatcggctacgtggcgctcgccaccatgctg
tcctcgctcctgagctggggcctgagcctgatcttcggcggcctgctcgcccgcgcgctc
gcccggcgcaccgaattgcggatggattatcgcgcggccggtgccgccgcctatctcggc
ctcggcgcgacctgggcgatgggcctgtcctcctccgcggcgcagcttcaggccaacccg
aaaagcctgccgccgggccttctgccgattaccggcgtgatcccgttcagcgagacgatc
ttcctgtggcagtcgatcctgatcgccgcgatcctcgtggtgatgtcggcgctgatcgcg
ctcgcctccgcgccgggccgcgagacggcggtgacggcgcaggatctcggcgtcgatgtc
tccaagcaggaggacagcatcgacccgcccaagcagcccggcgagtggctggagcacgcg
cccgtcctgacgatcctcatcggcctgctggcggcgggttggctgatccaggagttcgcg
cgccaggattggatggtcgcgatctccaacctcaacacctacaacttcctgttcctgatg
gtcgggttcgtgctgcactggcggcccaagcgcttcctggccgcgctctccaaggcggtc
ccggccaccgccggcatcctgatccagttcccgttctacgccgccatcgccgcgatcctg
acgggcgccaagaacgccgccggccacagcctttcggacgtcatcgcccacgccttcgtg
gcgatgaacacgcaaggctcattcccgctcgccatgggcgtctactcggcgctgctcggc
ttcttcatcccctcgggcggcggcaagtggctgttggaggcgccctacgtgatgcaggcg
gccaacgagctgaaggtgcatctcggctgggcggtgcaggtctacaatgcggccgaggcg
ctgccgaacctcatcaacccgttcttcatgctgccgctgctcggcatcctcggcctgaag
gcccgcgatatcgtcggcttcagcttcctccagcttatcgtccacctgccggtggtgctg
ttcctgctctgggcgctcgccttcacgctggaataccacccgccggtcctgccgggataa
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