KEGG   Methylorubrum extorquens DM4: METDI3716Help
Entry
METDI3716         CDS       T00947                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
mdi  Methylorubrum extorquens DM4
Pathway
mdi00473  D-Alanine metabolism
mdi00550  Peptidoglycan biosynthesis
mdi01100  Metabolic pathways
mdi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    METDI3716 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    METDI3716 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    METDI3716 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mdi01011]
    METDI3716 (ddlB)
Enzymes [BR:mdi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     METDI3716 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:mdi01011]
 Precursor biosynthesis
  Amino acid ligase
   METDI3716 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 ATPgrasp_ST GARS_A
Motif
Other DBs
NCBI-ProteinID: CAX25355
UniProt: C7CA03
LinkDB All DBs
Position
3655414..3656337
Genome map
AA seq 307 aa AA seqDB search
MSKHVAVLMGGWSSEREISLRSGNACAEALEGEGYRVTRVDVGPDIATVLTELKPDAALN
ALHGPAGEDGTIQGLLEILKIPYTHSGVLASALAMHKERAKTVMRAAGVSVPEGRVVNRH
DAAKSHPLTPPYVVKPIAEGSSMGVIIVRDERSHPPQILASDEWVYGEEVLAETYVAGRE
LTCAVLGDRALGVTEIKPVSGEWYDFDAKYAGGGSIHVLPADLKLNIYQRVQELALTAHQ
ALGCRGVSRADLRYDDTPGGTGALVVLEVNTQPGMTQTSLVPEIAAHAGQSFGELVRWMV
EDASLNR
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atgtccaagcacgtcgccgtcctgatgggcggctggtcttctgagcgggaaatctcgctt
cgctccggcaatgcctgcgccgaggcgctggaaggggaggggtatcgcgtcacccgcgtc
gatgtcgggcccgacattgcgacggtgctgaccgagctcaagcccgacgcggcgctcaac
gcgctccacggcccggccggcgaggacggcacgatccagggcctcttggagatcctgaag
atcccctacacccattccggcgtgctggcctcggcgctcgccatgcacaaggaacgtgcc
aaaacggtcatgcgcgcggcaggtgtgagcgttccggagggccgggtcgttaaccgtcat
gatgcggcgaagtcacacccgttaacccctccctatgtcgtgaagccgatcgctgaaggc
tcctccatgggggtcatcatcgtgcgtgacgagcgctcgcacccgccccagattctcgcc
tccgacgagtgggtctacggcgaggaagtccttgcagagacttacgttgccggccgcgag
ctgacctgcgcggtgctgggcgaccgggccctcggtgtgaccgagatcaagcccgtttcg
ggggagtggtacgacttcgatgcgaagtacgccggaggggggtcgatccacgtcctcccc
gcggatcttaaactaaatatttaccagcgtgtccaagagttggcgttaacggcgcatcaa
gcactgggatgtcgtggcgtcagccgtgccgaccttcgttacgacgacacgccgggtgga
accggcgctctcgtcgtcctcgaggtcaacacgcagccagggatgacccagacgagcctt
gtgccggagatcgcggcccacgcaggccagagtttcggtgaactcgtccgatggatggtg
gaggacgcttctctcaaccgctga

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