Methylorubrum extorquens DM4: METDI4193
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Entry
METDI4193 CDS
T00947
Name
(GenBank) rare lipoprotein A family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdi01011
]
METDI4193
Enzymes [BR:
mdi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
METDI4193
Peptidoglycan biosynthesis and degradation proteins [BR:
mdi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
METDI4193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
CAX25825
UniProt:
C7CDR1
LinkDB
All DBs
Position
4124785..4126209
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AA seq
474 aa
AA seq
DB search
MTHVMPRDLASIRTAADAPTRGAMPVLRPALQLLAVCAVALTTANCANNPAKLAGGASSG
SEIDPKYGVKASRRLYNEGDVIPKGGGRRFSGKPYVVAGKTYVPREDARGYVREGLASWY
GSAFHGRVTANGEVFDRHSIAAAHPTLPLPSYVRVTNLDNGHSMILRVNDRGPYHANRLM
DVSEEAARALEFHRKGTARVRVEYAGKASVAGSDDRKLLATLRTDGRPAAIGRAPVMMAD
LGPSEPEAAPERLERASRALAFRPAGERDDDAPETAAPVTRPARPAPIVLASAAVAVPAA
LQPTAARAAPFRPAPVALAAAPAKPAIEPRRMMAETGRSAQPAQGRHKDATAPAPTRLAS
TLAATPVKGASVPVRTAQAVPMKAAATKMPVQQFAATGPVKGAPKPTGKAAAPEPASRMA
AMPPTSKQAIAKLASTAPAPGIKPAAKTASKTAVAQAPGHSGAKAKRSQVAAAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtcatgccacgggatttggcatcgatcaggacggccgcggacgctccgacg
cggggtgcgatgccggtcctgcgaccggccctgcagctcctggcggtctgcgcggtggcg
ctgacgaccgccaactgcgccaacaatccggccaagctcgcgggcggcgcgtcctcgggc
agcgagatcgatccgaaatacggcgtgaaggcgagccgccgcctctacaacgagggcgac
gtgatcccgaaggggggcgggcggcgcttctcgggcaagccctacgtggtggcgggcaag
acctacgtgccgcgtgaggatgcccgcggctacgtgcgcgagggtctcgcctcctggtac
ggcagcgccttccacggccgggtcacagccaacggcgaagtcttcgaccgccactccatc
gccgccgcgcaccccacgctgccgctgccgagctatgtccgggtgaccaacctcgacaac
ggccactcgatgatcctgcgcgtcaacgaccgcggcccctatcatgccaaccgtctgatg
gacgtgtccgaggaggcggcccgcgcgctcgaattccaccgcaagggcacggcgcgggtg
cgcgtcgaatatgccggcaaggcctccgtcgccggcagcgacgatcgcaagctgctcgcc
accctgcgcaccgacggtcgccccgccgcgatcgggcgcgcgccggtgatgatggccgat
ctcggcccctccgagcccgaggctgcacccgagcggctcgaacgcgcttcccgcgcactc
gccttccgcccggcgggcgagcgcgacgacgacgcgccggagacggcggcaccggtcacg
cgcccggcccggcccgcgccgatcgtgctggccagcgctgccgtcgccgtcccggcggcg
ttgcagccgaccgccgcccgcgccgcgccgttccgtccggctccggtggcgctcgccgcc
gccccggccaagccggcgatcgagccgcgccgcatgatggccgaaaccggccgctccgct
cagccggcacagggccggcacaaggatgcgaccgctccggccccgacgcgcctggcctcc
actttggccgccactccggtgaagggcgcctccgtgcccgtccgtaccgcgcaagcggtg
ccgatgaaggcggcggccaccaagatgccggtgcagcaattcgcggccaccggccccgtc
aaaggcgcgcccaagcccactggcaaagccgcggcgcccgaacccgcctcgcgtatggcg
gcgatgccgccgacctcgaaacaggcgatcgccaagctcgccagcacggccccggcgccg
ggcattaagcccgccgccaagacggctagcaagacggccgtggcccaggcccccggccat
tccggcgccaaggcgaaacgctcgcaggtggcggcggcgaactga
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