Methylorubrum extorquens DM4: METDI5429
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Entry
METDI5429 CDS
T00947
Name
(GenBank) conserved hypothetical protein; putative ATP-dependent RNA and DNA helicase (N-terminal) and conserved C-terminal DEAD/DEAH box domain protein (C-terminal)
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
mdi
Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:
mdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
mdi03029
]
METDI5429
Enzymes [BR:
mdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
METDI5429
Mitochondrial biogenesis [BR:
mdi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
METDI5429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
CBP66_1st
Yae1_N
Motif
Other DBs
NCBI-ProteinID:
CAX27038
UniProt:
C7CMP3
LinkDB
All DBs
Position
complement(5371985..5375392)
Genome browser
AA seq
1135 aa
AA seq
DB search
MTLRTLHREARARGVTAVLGPTNTGKTHMAIERMLLHPTGMIGLPLRLLAREVYLRVVAK
VGSENVALITGEEKIKPDRPRYWICTIEAMPRDLDVAFVAIDEIQLAADMDRGHVFTDRL
LYRRGREETLLIGSSTMLPLVQALIPGVQTTTRPRLSSLTFAGEKKISRLPHRTAIVAFS
AEEVYAIAELIRRQRGGAAVVLGALSPRTRNAQVELYQSGDVDYLVATDAVGMGLNLDVD
HVAFAANWKYDGTRFRKLSPAEMGQIAGRAGRHIADGTFGSTGRCPPFEPEMVEALETHD
FEPVRMLQWRNPDLEFASLERLQASLDEHPHEQGLTRAPMGEDQQALEILMREDDIRDMA
KGPAAVRRLWDTCGVPDYRKVHPQTHADLVAQLYRFLMRGMAGRIPNDWFARHVAMIDRT
DGDIDALSQRIAQGRTWTFVANRPDWLLDPLHWQGETRRVEDRLSDALHERLASRFVDRR
TSVLMRRLREKTMLEAEITSGGDVTVEGQHVGRLHGFQFVPDPQAEGHEAKTLRSAADKA
LAGEIEARADRFASAADASLVLSHDGIIRWTGDPVAKLTPGDKLFEPGIRLIADDSLSGA
AREKVETRLAAWLRAHVVRLLGPLMEIETAADLTGLARGIGYQVVEALGVLERAKVAHEM
RTLDQDGRANLRRHGVRFGAYHIFLPALLKPAPRTLAAQLWALKNGGLDQPGLDEIAHLA
SSGRTSIKVDQNIAKGLYRAAGFRVCGERAVRVDILERLADLIRPAIAYRPGTTPGEPPA
GTADGDGFVATVNMTSLVGCSGEDFASILKSLGYVAQNRPGPAITVPLVAAAPTVPAART
AEAAPQEPAGEETAGEAASVEETSAEGTAQAPSQDATDVGATAEPSDEAAPAEATSEAGG
EAETVTAEAEPAAEEAAAAPVEAVAPIEETAPGEAETADAAPEAAAPMPAETADAAQAAA
ATGEVEAVDAADSAIPADEPSTEADAAAEPAAPETVEVWHLHRPQRHTGPRPGRGQGRPE
GRQDGRQEGRQDGRQDGRQDGRRNDGPRRPREDRPEGGRPARADGRPDSRREGQGEGGPR
REHQGGRNRPDRRDENRRPNPEQRPPRRERQPDPDSPFAALAALKAKLESDGGKR
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgacgctccgcacccttcaccgcgaggcccgcgcgcgcggggtcacggcggtgctcggc
ccgaccaacacgggcaagacgcacatggccatcgagcggatgctgctgcatccgaccggc
atgatcggcctgcccctcaggctcctggcgcgcgaggtctacctgcgcgtggtcgccaag
gtcgggtccgagaacgtcgccctcatcaccggcgaagagaagatcaagccggaccggccg
cgctactggatctgcaccatcgaggcgatgccgcgcgacctcgacgtcgccttcgtcgcg
atcgacgagatccagctcgccgccgacatggaccgcggccacgtcttcaccgatcgcctg
ctctaccggcggggccgcgaggagacgctgctgatcggctcctcgaccatgctgccgctg
gtgcaggcgctgatccccggcgtgcagacgacgacccgcccgcgtctctcgagcctgacc
ttcgcgggcgaaaagaagatctcgcggctgccgcaccgtacggcgatcgtcgccttctcg
gccgaagaggtctacgccatcgccgagttgatccggcgccagcgcggcggcgcggcggtg
gtgctcggcgcgctctcgccccgcacccgcaacgcccaggtcgaactctatcaatcgggc
gacgtcgattacctcgtcgccaccgacgcggtcggcatggggctcaacctcgatgtcgat
cacgtcgccttcgccgcgaactggaaatacgacggcacccgcttccgcaagctgtccccg
gccgagatgggccagatcgccggccgcgccggccgccatatcgccgacggcacgttcggt
tcgacggggcgctgcccgcccttcgagccggagatggtcgaggcgctggagacgcacgac
ttcgaacccgtgcgcatgctgcaatggcgcaacccggacctcgaattcgcctcgctggaa
cggctgcaggcgagcctcgacgagcatccgcatgagcagggcctcacccgtgcgccgatg
ggcgaggaccagcaggcgcttgagatcctgatgcgcgaggacgacatccgcgacatggcc
aagggccccgcggcggtgcgccgcctctgggacacctgcggcgtgccggactatcgcaag
gtccacccgcagacccatgccgacctcgtggcccagctctaccgcttcctgatgcgcggc
atggcgggacgcatccccaacgactggttcgcccgccacgtggcgatgatcgaccgcacc
gacggcgacatcgacgccctgtcccagcgcatcgcgcaagggcggacctggaccttcgtg
gcaaacaggcctgactggttgctcgatcctctgcattggcagggcgagacgcgtcgggta
gaggacagattgtccgacgccctgcacgagcgcctcgcgagccgcttcgtcgataggcgc
accagcgtcctgatgcggcgcttgagagagaagacgatgctggaagccgaaatcacctcc
ggcggtgacgtcaccgtcgagggtcaacatgtgggccgtcttcacggcttccaattcgtg
cccgacccgcaagccgagggacacgaagccaagaccctgcgctctgccgccgacaaggcg
ctggccggcgagatcgaggcgcgggccgaccgcttcgcctcggccgccgatgcctcgctg
gtgctctcgcatgacggcatcatccgctggaccggcgatcccgtcgccaagctgacgccg
ggcgacaagctgttcgagcccggcatccgcctcatcgccgacgacagcctgtccggcgcc
gcgcgcgagaaggtcgagacgcggttggccgcatggctgcgcgcccacgtcgtgcgcctg
ctcggcccgctgatggagatcgagacggcggccgacctcaccggactcgcccgcggcatc
ggctaccaggtggtcgaggcgctcggcgtgctggagcgggccaaggtggcgcatgagatg
cgcaccctcgatcaggacgggcgcgcgaatctgcgccgtcacggcgtgcgcttcggcgcc
taccatatcttcctgcccgcgttgctgaagcccgccccgcgcacgctcgccgcccagctc
tgggcgctgaaaaacggcggcctcgaccagcccggcctcgacgagatcgcgcatctggcc
agttccggccgcacctcgatcaaggtcgatcagaacatcgccaagggcctctaccgcgcc
gccggcttccgggtctgcggcgagcgggcggttcgcgtcgatatcctggagcggctcgcg
gacctgatccgcccggccattgcctaccgccccggcacgaccccgggcgagccgccggcc
ggcaccgcggacggcgacggcttcgtggccaccgtgaacatgacctcgctcgtcggctgc
tcgggcgaggatttcgcctcgatcctgaagtcgctgggctacgtcgcgcagaaccgtccc
ggcccggccatcacggtgcccctggtcgcggcggcaccgaccgtccccgccgcgcgcacc
gccgaggccgcaccgcaggagccggcgggcgaagagacagccggcgaggcggcatcggtc
gaagagacttcagccgagggtacggctcaggccccgtcgcaggacgcgaccgacgtcggt
gccacggccgagccgagcgacgaggcggcgcctgccgaggcgacgtccgaggccgggggc
gaagccgagacggtcaccgccgaagccgagcccgccgcggaagaggcggccgccgcaccg
gtcgaagccgttgccccgatcgaggaaacggcaccgggcgaggccgagaccgccgacgcc
gctcccgaagccgccgcgccgatgccggccgagaccgccgacgccgcgcaggcggctgcg
gcgaccggagaggtcgaggcggtggacgcggccgattcggcgattccggccgatgagccc
tccacggaggcggacgccgccgccgagccggccgcgcccgagaccgtcgaggtgtggcat
ctgcaccgtccgcagcgtcacaccggtccgcggcccggccgcggccagggacggccggag
gggcgccaggacggaaggcaagagggcagacaggacggccgccaggatggtcgccaagat
ggtcggcgtaacgacggcccgcgccgtcctcgcgaggaccgtccggaaggcggacgtccg
gcccgtgccgacggcaggcccgacagccgccgggaaggccagggcgaaggcggccctcgc
cgcgagcatcagggcggccgcaaccgccccgaccgccgcgacgagaaccgccgcccgaac
cccgagcagcgcccgccgcgccgcgagcgccagcccgatcccgattcgcccttcgcggcg
ctcgccgcgctgaaggcgaagctcgaatcggacgggggcaagcgctga
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