Microplitis demolitor: 103574731
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Entry
103574731 CDS
T05600
Name
(RefSeq) exosome complex exonuclease RRP44 isoform X1
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mdl
Microplitis demolitor
Pathway
mdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103574731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdl03019
]
103574731
Messenger RNA biogenesis [BR:
mdl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
103574731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Motif
Other DBs
NCBI-GeneID:
103574731
NCBI-ProteinID:
XP_008552462
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MLATKTFFRKTKSGNIFKIVRDHYLRDDIWCGSEACKLCRPRKKDLILEEETPGIQSSLI
SEPYYLLLDTNIVLDQINILEEDILCNVIILQTVLEEVKHRSSNVYKKLKDIIADPKRKF
YVFVNEHHKDTFVERVPGEKINDRNDRAIRVACQWYKSHLVASKNTNINIVLLTDDNDNR
TKAQDDGILAFTMEEYICSVENCGFLADKLCKKNYVVDGGRGEPLFPSHLTPGQLHDGIK
NGKLLQGTFLASRENFLEGSVNVEGMEKFIFVQGRVGLNRAIDGDIVAIELLPEEEWSMP
SELILQDEVDEEDPGDTLEEEKELIVETTKKVERTPTGKIVGIIRRKWRQYCGILQPSAV
KGNVKHLFVPAERKIPKVRIETRQSETLCSQRIIVAIDSWPRNSRYPLGHFVRALGVVGD
KETENEVLLLEHDVPHSRFSDAVLSFLPKLPWIITDEDIASREDLRHLDICSVDPPGCTD
IDDALHCRDLDNGNLEVGVHIADVTHFIRPGTALDKEAALRATTVYLVDKRIDMVPGLLS
SNLCSLRGNEERFAFSCIWEIDHDANIINTRYCKSVIKSRRAMTYEEAQLLIDDKSQNDA
LAVSLRGLNNLAKKLKKRRLENGALVLASPEIRFQVDSETHDPIEVEAKKLRETNSMVEE
FMLLANISVAGKILEEFPDCAMLRRHPEPPQSNFEPLIKAGRHQGFEINTTSGKELAQSL
EAAHKEDNPYFNTMLKILATRCMMQAVYFISGMVQQSEFFHYGLACPIYTHFTSPIRRYA
DIVVHRLLAVCIGADATYPDLLDKKKNHALCHNLNYRNRMAQYAGRASVALNTHLFFREK
IEDEDGYILFVRKNALQVLIPKYGLEGTLYLNKKGDTSGVKFTYNEEEHTQTCGDVVFRS
FDPVVVQLSLDRSNVQHEKLVFKLVKPEIPGFSVPDVKKRKVSDPEPTPVEVPAKKNKKQ
KKKKNKN
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgttggctacgaaaacattttttcgtaaaactaaaagtggtaatatttttaaaattgta
agagatcattacctacgagatgacatttggtgtggatccgaagcatgtaaattatgtagg
cctcgtaaaaaggacttaattctagaagaagaaacccctggtatccagagctcactaatt
tccgagccgtattatttattacttgacaccaacatagttcttgaccaaataaatatttta
gaagaagacattctttgcaatgtaataatcctccaaacagtactagaagaagtaaaacac
cgtagttctaatgtctacaaaaaacttaaagatattatcgcagaccctaagcgcaaattc
tacgtttttgtcaacgagcaccataaagacaccttcgtagagcgagtacctggggaaaaa
ataaacgaccgcaatgacagggccatcagggtggcctgtcaatggtacaaaagtcacctg
gtggcttcgaaaaatacaaatataaatattgttctgctcactgacgacaatgacaaccgg
accaaggcccaggatgacgggatcctcgcttttacaatggaagagtatatttgttcagtg
gaaaattgtgggttcctggcagataagctatgcaaaaaaaattatgttgtcgatggtggt
agaggtgaacccttgtttccttctcatttgacccccggccagttgcatgatggaattaaa
aatggcaaattacttcagggaacatttttagcttcacgtgaaaattttctagaaggaagt
gtcaatgttgaaggaatggaaaaatttatattcgtacaagggagagttggtttaaatcga
gcaatcgatggcgacattgtagctattgaattattaccagaagaagaatggtcgatgcca
agtgaattaattttacaagacgaagtcgatgaagaagatccaggtgatactttagaagaa
gaaaaagaattaattgttgagacgacgaaaaaagttgagcgcacgccaacaggtaaaata
gttggcatcatcagacgaaaatggcgacaatattgtgggatattacagccaagtgctgtc
aaagggaatgtgaagcatcttttcgtgccagctgagaggaagattccaaaagtgaggatc
gagactcgtcaatccgagactttgtgcagccagagaataattgttgccattgactcttgg
ccgagaaattcacgttatccattgggacatttcgtgcgtgccctgggtgtcgtcggtgac
aaggaaactgaaaacgaagtacttttattagagcatgatgtgccacatagcagattttcc
gacgccgttcttagttttcttccaaagttaccctggattattaccgatgaagacattgca
tcgagagaagatctgcgtcatcttgatatctgctctgtcgaccctccaggatgcacggac
attgacgatgcacttcactgcagagatctggacaatggaaacttggaagtgggcgttcat
attgcggatgttactcattttatacgacctggaactgctttagacaaagaagctgctttg
agagctactactgtttatcttgttgataaaagaattgacatggtaccaggtttgctgagt
tcaaatctttgttcacttcgtggtaatgaagaacgttttgctttctcatgtatttgggaa
atagatcacgatgcaaatatcattaataccagatattgtaaatcagttattaaatcaaga
cgagcgatgacttacgaagaagctcaattattaattgatgataaatcacaaaatgatgca
ttggcggtatcattgagaggattaaataatttagcaaaaaaattaaaaaaacgtcgcctg
gaaaatggagcgctcgtattggcatctccagaaataagatttcaagtcgacagtgaaact
cacgatccgattgaagtagaagctaagaaattacgcgaaacaaattcgatggtagaggag
tttatgttattagcaaatatatcagttgcgggaaaaattctcgaggaatttccagactgc
gcgatgctgagaaggcatccggagccaccgcaatcaaatttcgagccgctcataaaagcc
ggcagacatcaaggcttcgaaataaacacgacgagcggaaaggagttggcccaatcgctg
gaggctgctcacaaagaagacaacccgtactttaacacgatgttgaaaattttagcgact
cgttgtatgatgcaggctgtttattttataagcgggatggttcagcagtcggaatttttt
cactatggtctagcttgtcccatctacactcactttacatcaccaattagaagatatgct
gatatagttgtccaccgacttcttgctgtctgtatcggagctgacgcaacttatccagat
ctgctggataagaagaaaaatcatgcgttatgtcataatttgaattatcgtaatcgtatg
gctcaatatgctggacgtgcttctgttgctctgaatactcatttgttcttccgtgaaaaa
attgaagatgaagacggctacatattgtttgtccgtaagaacgctctgcaagtactaatt
cctaagtacggattagaagggacgttgtatttgaataaaaaaggtgatacgtcaggtgtt
aaatttacttacaatgaagaagaacacacgcagacttgtggtgacgttgtgtttagatct
ttcgatcccgttgttgtacaattaagtttagacagatcgaatgttcaacacgaaaaattg
gttttcaagctcgttaagccagagattcctggatttagtgttcccgatgtcaaaaaacgt
aaagtgtcagatcctgagccaacgcctgtcgaagttccggccaaaaaaaataaaaaacag
aagaagaagaaaaacaagaactga
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