Malus domestica (apple): 103405849
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Entry
103405849 CDS
T03194
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103405849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103405849
Enzymes [BR:
mdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
103405849
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
103405849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
103405849
NCBI-ProteinID:
XP_008343084
LinkDB
All DBs
Position
17:32494415..32497485
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AA seq
711 aa
AA seq
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MGNPDALSNQDNGRRFGLTGPILLAGPAESDVTKTRELENYLQDAGLYESQEEAVRRQEV
LGSLDQTVKAWVKKVSKAKGFNEQLVDEANALIVTFGSYRLGVHGPGADIDTLCVGPKYA
TRQEDFFGELRRMLSEMPQVTELNPVPDAHVPVMTFKFSGVAIDLLYAQLALLVIPEDLD
ILQDSVLQGVDEQTVRSLNGFRVTDRILRLIPSIQNFCTTLRCMRLWAKRRCVYSNVAGF
LGGINWALLVARICQLYPNALPNMLVSRFFKIYTQWHWPNPVMLCAIEAGSLGLQVWDPR
RNKMDRLHLMPIITPAYPSMNSSYSVSPSTKCIMLDEFQRGNDICKAMEANEAGWDTLFE
SSAFFEAYKNYLQIDITAENDDDFRAWKGWVKSRIRQLMLKIERHTSGKLLCHPQPGDFS
DKSRGFHSSFFMGLQRCQGVCADDGQRYFDIRGAIEEFKQADVNRYTLWKPGMEICVSHV
NRKSIPNFVFPGGVRPPRPSKVTWERRQGSEPTVSGASEPHKLCDAKTDLDGSDGRPKRK
QVDSNVEIDSSHAKSLRPCGEEFREGSPSMSSSVNSCSIKCDSMDANNINSGKTGIPRDI
PYQNDQTESLSRCNPPIDSLPAAANISNSKEAEKLALEEKITATKEGASVGTPINSSNGA
AGPSNDSYNGRVEELVDEFVAPSSNGTSFPPAAQRRPIIRFSFSTFVKTSG
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccctgatgcattaagcaatcaagataacgggcggcggtttggccttacgggg
cccatcttgctggccggaccggccgagtctgatgtgaccaagactcgtgaactggaaaac
tacttgcaagatgctggattgtatgagagtcaggaagaggctgtgcgcaggcaggaggtt
cttggcagcctcgaccagactgtcaaggcgtgggttaagaaagttagcaaggccaaggga
ttcaatgagcaactggtggatgaagcaaatgctttgatcgtcacctttggatcgtatcgg
ctaggggttcatggcccaggagcagatatagacacactctgtgtcggtcctaaatatgca
actcgtcaagaagatttcttcggcgagctacgtaggatgctgtctgagatgcctcaagtg
acagagttgaaccctgtacccgatgctcacgtcccagtcatgacattcaagttcagtggg
gtggcaatagatcttctttatgcgcaactagcactcttggttattccagaagacttggat
atattacaagactcagtactacagggtgtagatgaacagacggttcgtagtcttaatggt
ttccgagttacagaccgaattctgcgtttaatcccaagcattcagaacttctgcacgact
ttgagatgcatgaggttatgggcaaagcgtcgttgtgtttattccaacgttgcaggattt
cttggtggtataaattgggcattgcttgttgctcgcatatgccaactttacccgaatgcc
ctgcctaatatgctagtgtctcggttctttaagatatatacgcagtggcactggccaaat
cctgtcatgctctgtgctattgaagctgggtctcttggactgcaggtctgggatcctaga
agaaacaaaatggacaggcttcatttgatgcccataattactccggcatatcccagcatg
aactctagctacagcgtgtctccgagtactaagtgtatcatgttagacgagtttcagagg
ggaaatgatatttgtaaggctatggaagcaaacgaggccggttgggataccctttttgag
tcttctgctttctttgaagcgtataagaattatttacagatagacatcactgcagaaaat
gatgatgactttagagcatggaaaggctgggttaagtcccgtatccgtcaactaatgctg
aagattgagaggcacacatccggcaagctgctgtgtcacccacaaccaggtgatttttca
gacaaatcaagaggttttcatagctctttcttcatgggtctacaacgatgtcaaggagtt
tgtgccgatgatggccagcgatactttgacataagaggagcaattgaggagtttaagcaa
gctgatgtaaaccgttacacattatggaaacctggaatggagatctgtgtatcccatgta
aaccgcaagagcatcccaaattttgtatttcctggtggggttcgacctccgcgcccatct
aaagtaacttgggagagaaggcagggttcagaaccaacggtttctggagcatctgaacca
cataaattatgtgacgctaaaactgatttagatggatcagatggcaggccgaagagaaag
caggtggatagtaatgtagaaattgactcaagccatgccaagtctttacgtccctgtggt
gaagaatttcgtgagggtagcccttctatgagcagcagtgtcaattcatgttccataaaa
tgtgacagtatggatgcaaacaacattaactccggaaagacaggaatcccaagagacatt
ccatatcagaatgatcagactgaatctttgtcaaggtgcaatccaccaatcgatagtcta
cctgctgctgcgaatatatcaaattctaaagaagcagagaagctggcattggaggagaag
attacggctacaaaggagggcgcatcagttggtacgccaataaactctagcaatggagct
gctggtccttccaatgattcatacaatgggcgcgtagaggaactcgtggatgaatttgtg
gcgccatcctcaaacggaacctcttttccacctgcggcgcaaagaaggccaatcatcagg
ttcagtttctctacattcgtcaagactagtggctaa
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