Malus domestica (apple): 103411042
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Entry
103411042 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103411042
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdm01007
]
103411042
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103411042
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103411042
Enzymes [BR:
mdm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
103411042
Amino acid related enzymes [BR:
mdm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
103411042
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103411042
Prokaryotic type
103411042
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
103411042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
TyrRSs_C
Motif
Other DBs
NCBI-GeneID:
103411042
NCBI-ProteinID:
XP_008347911
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All DBs
Position
8:complement(30462692..30467472)
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AA seq
482 aa
AA seq
DB search
MAAATTSRAFLYSHYYRSLPFFFPPLSTVSRLPTVRRNKLRNPVILSTIKCFQSLSGRPN
VVEILEERGLLESITSEHLRQSCSDPNLPPLKVYCGFDPTAESLHLGNLIGIVVLSWFQR
CGHHPVALIGGATARVGDPSGKSLERPXLDLDTLSRNTTGVTNTITRILGGISILNNYDW
WKEVRLLEFLKDVGRYARVGSMIAKESVKKRLESEQGMSYTEFTYQLLQGYDFLHLFRNE
GVNVQIGGSDQWGNITAGTELIRKILRVDAAAYGLTFPLLLKSDGTKFGKSEDGAIWLSP
SMLSPYKLYQYLFSVPDVDVVRFLKILTFLDMDDIKQLESEMERPGYLPNTAQRRLAEEV
TRFVHGQDGLDEALKATEAMRPGADTKLDWNTIKAISEDVPSCSFLYHQVLDLSILDLSV
SSGLLDSKSAARRLLKQGGLYLNNSKVDSENKRIEPEDIVDGKLLLLSAGKKNKVLVQIS
DT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccaccacctcaagggcctttctctactcccattactaccgtagtctccca
ttcttctttccccctcttagtactgtgtctaggttacccaccgttcgcagaaataagttg
aggaatccagtcattctctctaccatcaagtgttttcagtccttgtccgggcgtccaaat
gtggttgaaattcttgaagagagagggttgcttgaatccatcaccagtgagcatttaagg
caatcctgttctgaccccaatctccctcctctcaaagtctattgtgggtttgacccaact
gccgaatccttgcacttgggaaaccttattggaattgttgtcctctcatggttccaaaga
tgtgggcatcaccccgttgctttgatcggtggtgccaccgctcgtgttggagacccttcc
ggcaagagcttggagagaccgnagctcgaccttgatactctgtcccgaaacaccacagga
gtaaccaatacgattacgagaattctgggtgggatttccatcttgaataattatgattgg
tggaaagaggttcggttgttagagtttctcaaagatgtgggtcggtatgcaagagtgggg
agcatgatagcaaaggagagtgtgaagaagaggttggagtcagaacaaggaatgagctat
actgagttcacttaccagttattgcagggatatgatttcctccacctcttccgcaatgaa
ggtgttaatgtccagattggaggtagcgatcaatgggggaatataactgcagggactgaa
ctcatacgcaagattcttcgtgtggatgctgctgcttatggcttgacatttcctcttcta
ctgaagagtgatggaaccaaatttggcaagtccgaagatggtgccatatggctttcgcca
tccatgttgtctccctataagttgtatcagtatttgttctctgttcccgatgttgatgtg
gtcaggtttctcaagattctcactttcctggacatggatgacatcaaacagttagagagc
gagatggagagacctggatacttgcccaacacagctcagcgcaggcttgctgaggaggtc
actcgttttgtgcatggtcaagatggtctggacgaggccctcaaggcaactgaagcaatg
aggcctggtgctgatactaaattggactggaacaccattaaagccatttctgaggatgtc
ccctcatgctcattcctgtatcatcaggtccttgatctctctattcttgatctctcagtt
tcatctggtttgcttgacagcaaatctgctgcccggcgtctgttgaagcaagggggactt
tacttgaacaactccaaagttgatagtgaaaataagagaattgaacctgaagacattgtg
gacgggaaacttctgcttttatctgcaggcaagaagaataaggttctggtacagataagc
gacacctga
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