Malus domestica (apple): 103427770
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Entry
103427770 CDS
T03194
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
mdm
Malus domestica (apple)
Pathway
mdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103427770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103427770
03036 Chromosome and associated proteins [BR:
mdm03036
]
103427770
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103427770
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103427770
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103427770
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103427770
FA (Fanconi anemia) pathway
Downstream FA components
103427770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Motif
Other DBs
NCBI-GeneID:
103427770
NCBI-ProteinID:
XP_008364394
LinkDB
All DBs
Position
1:complement(7218416..7226160)
Genome browser
AA seq
1218 aa
AA seq
DB search
MSNRTLPLQKSRSLNMATWHMCSDAGNNYRWYPDPKPEVINGVVYRPSESDRSSSSRVPS
MGDVLLQGCSKLAEAEIRNQVVEGGGVGMFRNGFGKPVAVKQSSLAKASSLLLGSQIATP
SGQVQATIMNNRSGCGGGGAGGGGGCVGGLSNSLFHTGSGKMVNISPDSLVRAKTLLGFQ
DDDNAPTKIVGFGFNSAALVAGTPLIMNKTVSLQTRFQNDPERLNLTPDKVKPSSIKFHT
AGGRSISVSTDAIQRARSLLGDPELGNFFNEANAGDLGFAFSKGSPHDNRTPISHQKKIN
NFLTNTSPSPLQPLPNQLRSSAISSGTNLITQFDGVSNETASRSNSKLAYRQNPLSKTHN
TVENNCWANGIDLRTNHVGMPPATPLFDISNAVGTPATNNTQMTGLKRRLGRSSISPFKA
SPSPLQPLSNQLWSSTISSGTNLITQFDGVSNETASRSNSELPYRQNPLSRTHNTVENNC
LANGIGLRTNHAGKPPAKPLVDISNTVGTTAMNTKQITGVKRRLGRSSISPFKKPRTNSS
TPLPRNVPLVPNGVSTLSSDHSCSKRRVSTRYPSPVTRMYVKKYFGMPRPDQNMLECLSD
PVRRITATNAEKYTFLDESGLNCIGAEAFVHMLACYGASMQYTSREWVTNHYKWVVWKLA
CYERYYPAKSFGKFLTVSNVLEELKYRYEREVNHGHRSAIKKILEGDASPSSPVVLCISA
ICSNCDPNMETSSGAENSSAAKVELTDGWYSVDAVLDALLSKQLASGKLFVGQKLRIWGA
ALSGWAGPVSPLEVSRQVSLRLHINGTYRAHWADQLGFCKGVCAPLAFKCAKSGGGPVPC
TLVGVKRIYPVLYKERLSNGRSIVRSERLETQMVESHQQRRSNVIEGVISEFQRGLEHSH
LCNDSDDEGAKLLKILQTAAEPEILMAEMSAEQLKSFTKYQAKLEAIKQSDMEKSILKAL
EDAGLSEREVTPFMRVRVVGLTRKLYQGKDCSKEGLITIWNPSEKQNSELVEGCAYSISG
LIPTSSDGDILKLLARGSTTKWQPLSQQAINYFEPFFSPRESVLLSDLGKVPLSSEFDIA
ASVVFVGEAYIAAQQKKQWVFVTDGSKSELKSEGLCDSLLAICFSSPYIDNVSNAPINYN
LTGSTVGFCNLTKREKDEMNCLWVAEATENSAYFLTFDNPRCSHLKDAAASSERWKRMSI
LTINRLKERVLFIIGASK
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcgtaccctccctctccagaaaagtcgatccctgaacatggcgacatggcac
atgtgctcggatgccggcaacaattaccggtggtacccggaccccaaacccgaagtcata
aacggtgtcgtttatcgtcctagtgagagtgataggagcagcagcagccgggtgccgtcc
atgggggatgtgttgctgcaaggatgttctaagctggcggaggctgagattcgaaatcag
gttgttgagggaggtggcgttgggatgttccgcaacggattcggaaagcccgtcgccgtc
aaacaatcttcattagccaaagcatcttcgttgcttcttggctcccaaatcgcaacaccc
tcaggccaagtgcaagctacgattatgaataacagaagtggatgtggaggcggaggtgca
ggtggaggcggaggatgtgtaggtggtttatctaattcccttttccacactggatccggt
aaaatggttaatatatcccccgacagtcttgtcagggcgaagacattgcttggattccaa
gacgatgacaatgctcccaccaagattgtgggttttggttttaacagtgctgccctggtt
gcagggactcctttaattatgaataagactgtttcactgcaaactagatttcagaatgat
cctgaaaggcttaatttaactcctgataaagttaaaccttcatcaatcaagttccataca
gcaggaggtagatctatatctgtttctactgatgcaatacaacgtgcaaggagtctactt
ggtgacccagagttgggaaatttcttcaatgaggccaatgcaggtgacttgggtttcgca
ttttctaaaggtagtccacatgataaccgcactcccatttcccaccagaagaagattaac
aactttttaaccaatacttctccatctccactgcaaccattgcctaatcaattgcggtcg
tctgctataagttcgggtactaacctgattactcaattcgatggtgttagcaatgaaact
gcttctaggtcaaacagtaagttagcttatcggcagaatccccttagcaagacccacaat
acagtagaaaacaattgttgggcaaatggtattgatttgaggactaatcatgttggaatg
ccaccagccacgccattgtttgatatttcaaatgctgttggcacaccagctacgaataat
acacagatgactggtttaaagaggaggttgggaagaagttctatttctccattcaaggct
tctccatctccactgcaaccattgtctaatcaattgtggtcgtcaactataagttcgggt
actaacctcattacccaattcgatggtgttagcaatgaaactgcttctaggtcaaacagt
gagttaccttatcggcagaatccccttagcaggacccacaatacagtagaaaacaattgt
ttggcaaatggtattggtttgaggactaatcatgctggaaagccgccagccaagccattg
gttgatatttcaaatactgttggcaccactgctatgaatactaaacagatcactggtgta
aagaggaggttgggaagaagttctatttctccattcaagaagcctcgcacaaactcctcc
actccattgcctaggaatgttccccttgttcctaatggtgtgtctacattgtcctctgat
cattcatgttccaaaagaagggtttctacacgatatccttcacccgtgactagaatgtat
gtgaagaaatactttggaatgccgcgacctgaccagaacatgttggagtgtttatcagat
ccagtgagaagaatcaccgcaactaatgcggaaaagtatacgtttcttgatgagtctggc
ttaaactgcataggagcagaagcttttgtccacatgctggcctgttatggagcttcaatg
caatatacctccagagagtgggtcacaaatcattacaagtgggttgtctggaaactggct
tgctatgagagatattatccagctaaatcgtttggaaaattcttgacagtctccaatgta
ctcgaggaattgaagtatagatatgaaagagaagtgaatcatggtcaccggtctgcaatt
aagaagattctggaaggagatgcatcaccttcttcaccggtggttctatgcatttcagct
atttgctcaaattgtgacccaaatatggagactagctctggagctgaaaatagtagtgct
gcgaaagtcgagcttactgatggttggtattcagtggatgctgttctcgatgcactcctg
tcaaagcagcttgctagcggaaaattgtttgttggacagaagcttcggatctggggagca
gcactcagtggctgggctgggcctgtttcacccctcgaggtttcaagacaagtctcttta
cggctgcacataaacggaacatatagagctcattgggctgatcaattgggattttgtaaa
ggtgtttgtgctcccttagcatttaagtgtgccaagagtggtggaggtccagtcccttgc
actcttgtaggagtcaaacggatataccctgttctttacaaggagaggttaagtaatgga
agatctattgtaagatctgagaggttggagacccaaatggtggaatcacaccaacagagg
cgctctaatgttatagaaggcgttatctctgagttccaaagaggattagaacattcgcat
ttgtgtaatgatagcgatgatgaaggagcaaaactcttgaagatactacagacagcagct
gaacctgaaattttaatggcagaaatgagtgcagaacagttgaaatcttttaccaaatat
caagcaaagctagaggccatcaaacagtcggacatggagaaatcaattctgaaagcactg
gaagatgccggcttaagtgagagggaagtcacgccattcatgagagtgagggtggttgga
ctaacaagaaaattataccaagggaaagactgttccaaagaaggcttaataacaatctgg
aacccatctgagaaacagaactctgagctggtcgagggatgtgcatatagcatttctgga
cttataccaacaagttctgatggagatattttaaaattgctggcaagaggatcaacaaca
aaatggcagcctttatctcagcaggcaataaactacttcgagccatttttcagtcctcgc
gaatcagtcttattgtcagatttgggtaaagttcctctctccagcgaatttgatattgct
gcatccgttgtgtttgtgggagaggcttatatagctgctcagcagaagaaacagtgggtg
tttgtaacagacggctccaaatctgaattaaagtcggaaggattatgtgattctctactt
gcaatctgcttctcttcaccatacattgacaatgtttcaaatgctcctataaactataac
ctcacaggatctacggttgggttttgtaatctgaccaagagagaaaaggatgaaatgaat
tgcctttgggtagctgaagctacagaaaattcagcttactttttaacttttgacaatcca
cgttgttctcatctcaaagatgctgctgcctctagtgaaagatggaaaaggatgtctatc
ctgactatcaataggctaaaggagagggttctatttattattggggcaagtaaatga
DBGET
integrated database retrieval system
