Malus domestica (apple): 103434397
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Entry
103434397 CDS
T03194
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103434397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103434397
Spliceosome [BR:
mdm03041
]
Common components
Common spliceosomal components
SR proteins
103434397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
103434397
NCBI-ProteinID:
XP_008370959
LinkDB
All DBs
Position
14:4988223..4992817
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AA seq
262 aa
AA seq
DB search
MSHFGRSGPPDITDTYSLLVLNITFRTSADDLFPLFDKYGKVVDVFVPRDRRTGESRGFA
FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRISEALPKSRHRSRSR
SPRRRYRDDFRDRGYRRSRSRSWDRYDRDRYHGRDRDYRRRSRSRSASPDYYRGRGRGRY
DDERRSLSPYRSPHRSRSIDSASPARRSPSPRKSPSPLSRSRSASPDRRSCDGQSPTSRS
ASLRHRPADSQSPSPRNSDVDD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggtaggtctggccctccggacatcaccgacacctactctctcctcgtc
ctcaacatcaccttccgtacgagtgctgatgatctgtttccacttttcgataagtacggc
aaggttgttgacgtcttcgtccccagggaccgaaggactggggagtcgaggggctttgct
tttgtacgatacaaatatgcagatgaggctcagaaagcagttgaaaggcttgatggaaga
gttgttgatggccgcgagataactgttcagtttgcaaaatatgggccaaatgcagagagg
attcataaaggaaggatttctgaagctctaccaaaatcaaggcacaggtcaagaagtcgc
agtcctcggagaaggtaccgagatgacttcagagaccgtggctacaggagaagtcgcagt
aggagttgggacaggtatgaccgtgacagataccatgggagggatagagactatcgccga
cgaagcaggagccgcagtgccagtcctgattactacaggggcaggggaagggggcgctat
gatgatgaaaggcggagtctgagtccgtatcggagtccacatcgaagtcgttctattgat
agtgcctcccctgctaggcgtagccctagtcctcgtaagagcccttccccactaagcagg
agccgcagtgccagccctgatagacgtagttgtgatggacaatccccaacctctcgaagt
gcttcactacgccatcgtcctgctgattctcaaagcccatcccctcgaaattcagatgtt
gatgattga
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