Malus domestica (apple): 103439706
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Entry
103439706 CDS
T03194
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103439706
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mdm01007
]
103439706
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103439706
Enzymes [BR:
mdm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
103439706
Amino acid related enzymes [BR:
mdm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103439706
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103439706
Prokaryotic type
103439706
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1_2
WD40_2
Motif
Other DBs
NCBI-GeneID:
103439706
NCBI-ProteinID:
XP_008376514
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All DBs
Position
7:33235884..33242825
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AA seq
1101 aa
AA seq
DB search
MIRAHLRVLGTQPHIFYHFISNQIKFAAAAPSLLRRFHVQRPLQSSPPAGSAPMGNGKGI
EDPEKKKKKEEKAREKELKKQKALEKAAKLQAQQASSSSSKKSEKKHVKRSNQEEENEED
FIDPETPFGQKKRMSNLMAKEYSPSVVEKSWYEWWEKTGFFVADAKSSKPPFVIVLPPPN
VTGALHIGHALTAAVEDTIIRWRRMSGYNTLWVPGMDHAGIATQVVVEKKLMRESKLTRH
DIGREKFVAEVWNWKNKYGGTILQQLRRLGASLDWSRECFTMDEKRTKAVTEAFVRLHKQ
GLIYRDNRLVNWDCVLRTAISEIEVDYIDVKERTLLKVPGYENPVEFGVLTSFAYPLEEG
LGEIVVATTRVETMLGDTAIAVHPNDERYRHLHGKHAIHPFNGRRIRIICDAILVDPEFG
TGAVKITPAHDPNDFDVGRRHNLEFINIFTDDGKINQDGGEFAGMPRFKAREAVTEALKK
KGLFKDAKGNEMRLGICSRSQDVVEPMIKPQWYVKCSGMGKEALHAAIDDENRKLEIIPK
QYTADWKRWLESIRDWCISRQLWWGHRVPAWYVVYEGDSPDNFGASDERWVVARNEEEAK
AQASLTFEGKFQLMQDPDVLDTWFSSGLFPLSVLGWPDDTEDLKAFYPTSVLETGHDILF
FWVARMVMLGITLGGDVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGITLEGLHQ
RLLEGNLDPKELTVAKEGQVKDFPKGIEECGADALRFALVSYTAQSDKINLDIQRVVGYR
QWCNKLWNAVRFAMSRLGDDYVPPSDVNPDALPFSCQWILSVLNKVISKAVLSLEAYDFS
DAATAVYAWWQYQLCDVFIEAIKPYFSGNNPRFESERGFAQATLWLCLDNGLRLLHPFMP
FVTEELWQRLPSPKDHKRPASIMICEYPSTVECWTNEGAESEMNLIDSVVKSLRSLAKES
RERRPASVLCRTPLDREIICSRQLEIETLANLSSLTVINENDAAPTGCVVGVVNENLSVY
LKLQGSRSLEADLEKIRKKMEDIKLQQEKLSRAMNVAGYKEKVPEKIQKANADKLESLEK
EKLSLEEASQHMEAQISGNEQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgattcgggcccaccttagggttttaggaacgcaacctcacatcttctaccacttcatc
agcaaccagatcaaatttgcagcagcggcgccgtctcttctccgccgcttccacgttcag
aggccccttcagtcttctcctccagccggtagcgcgccgatgggtaacggaaaagggatt
gaagacccggagaagaagaaaaagaaggaagaaaaggcaagagagaaggaattgaaaaag
cagaaagctttagagaaagctgctaagcttcaggcgcaacaagcgtcgagttcttcttct
aaaaagagtgaaaagaagcatgtaaagcgttccaaccaggaggaggagaatgaagaggac
tttattgatccagagactccatttggccagaagaaacggatgtcgaatctaatggcgaaa
gagtatagtccaagtgttgtagagaaatcgtggtatgaatggtgggagaagacagggttc
tttgtggcagatgccaagagctccaaacctcctttcgtcattgttttgccacctcccaat
gtgactggtgcccttcatattggccatgctcttactgctgctgttgaggacactataatt
cgttggcggagaatgtctggttacaataccttgtgggtgcctggaatggaccatgctggc
atagcaacacaggtggttgtagaaaagaagctaatgcgtgaaagcaaattaaccaggcat
gatattggtcgtgagaaatttgtggctgaagtttggaattggaaaaataagtatgggggc
accattttacagcagctacgtcgtttgggtgcttctttggactggtcccgtgagtgcttt
acaatggatgagaaaagaacaaaggctgtgacagaggcttttgtaaggcttcataagcaa
gggcttatctacagggataatcgcctagtgaattgggattgtgtcttgcggacagcaata
tctgaaattgaggtggactatattgatgtaaaagaaaggacgctactaaaggttccggga
tatgagaaccctgtagaatttggagttttgacttcatttgcttaccctttggaagaaggt
ttaggtgagattgttgtggccactactagagtggaaacaatgcttggtgatactgctatt
gctgtacatcctaatgatgaaaggtatcggcatcttcatgggaaacatgccattcatcct
tttaatggaagaaggattcgtataatatgtgatgcaattcttgttgatccagaatttggg
actggtgctgtgaagattacaccggcccatgatcctaatgattttgatgttggaaggcgc
cataatcttgaatttatcaacatctttactgatgatggaaaaataaaccaggatggtgga
gaatttgcagggatgccacgtttcaaagcccgagaggcagtgactgaagcactaaagaag
aagggcctctttaaagatgccaagggcaatgagatgcgccttggaatttgctctagaagt
caagatgttgtggagcccatgataaagccccaatggtatgttaaatgcagcggtatggga
aaagaagcccttcatgctgccatagatgatgagaataggaagcttgagatcatcccgaaa
cagtatactgctgattggaagagatggcttgagagcattcgtgattggtgcatttcaagg
caactctggtggggtcaccgtgttcctgcatggtatgttgtttatgagggtgatagtcca
gacaattttggagcatcagatgagcgatgggtggttgcgagaaatgaagaagaggccaaa
gcacaggctagtctaacatttgaggggaaatttcagttaatgcaggatcctgatgtgctt
gacacgtggttttcttctggtcttttcccattgtctgtgttgggctggccggatgataca
gaagatctgaaggcattttatcctacttcagttcttgaaaccgggcatgacattctcttt
ttctgggttgctcgaatggtaatgcttggaattactttgggtggcgacgtaccttttaca
aaggtatatttgcaccctatgattcgtgatgcacatgggcgtaaaatgtccaagtccttg
gggaatgtcattgatcctcttgaggtaataaatggtattacccttgaaggtctccatcag
aggcttttagagggaaatttggatcccaaggaattgactgtagccaaagaagggcaagta
aaggactttcctaagggtattgaagaatgtggtgcagatgctctccgttttgcccttgtc
tcttacactgctcagtctgataagataaatctggacatccaaagggttgtgggttatcgt
caatggtgtaataaactgtggaatgcagtacgatttgctatgagcaggcttggggatgat
tatgttcccccctcagatgtaaatccagatgcgcttccatttagttgccagtggatactt
tcagtactaaacaaagtcatctccaaagctgttttgtcactggaagcatacgacttctcg
gatgcagccactgcagtgtatgcttggtggcagtaccaattgtgcgatgtctttattgaa
gctatcaagccttacttttctggcaacaatccaaggttcgagtctgaaaggggttttgca
caagccacactatggttatgtcttgacaatggtctgcggttgcttcatccatttatgcca
ttcgtcacagaagaactgtggcagcgccttccatcaccaaaggatcacaagaggccagcc
tcaatcatgatatgcgaatatccttccactgtagagtgctggacaaatgaaggggcggag
tccgagatgaatcttatagattctgttgtgaaatctcttcgttcacttgcaaaagaaagt
cgtgaaaggcggccagcttctgtgctttgtcgaacaccattagatagggaaataatatgc
agccgtcaactggagattgaaacgctggccaatttgtcatctttgacggtaatcaacgag
aacgatgctgctccaactggttgtgtggtgggtgttgtgaatgaaaacctttctgtttat
cttaagcttcaaggaagtcgctcattagaagccgaccttgaaaaaatccggaagaagatg
gaagacattaaattgcaacaggagaagctatccagggcgatgaacgtagccggttacaaa
gaaaaggtcccggagaagattcagaaagctaacgcggacaagcttgaatcactcgagaag
gaaaaattgtctcttgaagaagcaagccagcatatggaagcacagatatcgggcaacgag
cagtaa
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