Malus domestica (apple): 103440486
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Entry
103440486 CDS
T03194
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103440486
Enzymes [BR:
mdm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
103440486
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
103440486
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
103440486
NCBI-ProteinID:
XP_008377398
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All DBs
Position
8:2285208..2288764
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AA seq
645 aa
AA seq
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MSFSSTPARLTLLALLSATTVYCFYKSRRLRRLKLSLNPNSSSSPRRGKLFFVSQTGTSE
ALARRLLDVLTSNGVAFDLVDPSNYEPEDLPKETLVLIVASTWDDGKPPPNARFFSNWLA
ESAEDFRVGSLLLSNCKFAVFGVGSRAYGATFNAVGKDLARRMRALGASEMFPIWESDVD
GGDLDEVFDAWSGKVVRFLKGGAAENGGVLGNGVGDECEAESFDGSDEDEEDEEEDGEES
GVVDLEDIAGKGPSRRNPVAVTKTNGTVNGKKEMVTPVIRASLTKQGYKIIGSHSGVKIC
RWTKSQLRGRGGCYKHSFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGKSWQWKMDD
PLEIVNSAIDQHTKMIKQMKGVPGVTLERLTEGLSPRHCALSLVGEPIMYPEINSLLDEL
HRRRISTFLVTNAQFPEKIKMLNPITQLYVSVDAATKESLKAIDRPLFGDFWERFIDSLT
SLKDKQQRTVYRLTLVKGWNTEDIDAYYNIFSLGSPDFVEIKGVTYCGTSATSKLTMENV
PWHADVKTFSEALALKSNGEYEVACEHVHSCCVLLAKTSKFKINGQWFTWIDYEKFHDLV
ASGKPFDSKDYMAPTPSWAVYGADEGGFDPYQSRYKKERHHRPNQ
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctcctccacccctgcgcggctcactctcctcgccctcctctccgccaccacg
gtctactgcttctacaaatcccgccgcctccgacgcctcaagctctccctaaaccctaac
tctagctcctcgcctcgcagaggcaagctcttcttcgtctcccaaaccggcacctccgaa
gctctagctcgtcgcctgctcgatgttctgacgtcgaacggcgtcgctttcgacctcgtg
gaccccagcaactacgagcccgaggacctgccgaaggaaaccctagttctgatcgtcgct
tcgacgtgggatgacgggaagccgcctccgaacgccagattcttctccaattggctcgcc
gagagcgcggaggacttcagggtgggatcgctgttgctctccaattgcaaattcgccgtc
ttcggcgtcgggagccgagcctatggcgctacgttcaatgcggtggggaaggacttggct
aggaggatgagggcgttgggcgcttctgagatgtttccgatttgggaaagtgacgtggac
ggtggtgatttggacgaggtgtttgatgcttggagtgggaaggtggtgaggtttctgaag
ggtggtgcggcggaaaatggcggggttttgggtaatggggttggcgatgaatgtgaagct
gagagctttgatgggtcagacgaggacgaggaggacgaggaggaggatggtgaggagtca
ggggttgttgaccttgaggatattgcaggtaaaggaccttcaagaaggaatccagtggcg
gtgacgaagactaatgggacagtgaatggtaaaaaagagatggtcactccggtgattcgg
gctagcttaacgaagcaggggtataaaatcattggttcacatagtggtgtcaaaatttgt
agatggacaaagtcgcagctccgaggccgtggaggttgctacaagcactcgttttatggt
atagaaagtcacaggtgcatggagacaacccctagtttggcatgtgccaacaaatgtgta
ttttgttggagacatcacacaaatcctgtcggaaagagttggcagtggaagatggatgat
ccgttagaaattgttaactctgccatagaccagcacacaaaaatgatcaagcaaatgaaa
ggagttcctggtgttacattggagcgattaacagagggtctctctcccaggcattgcgcc
ttatctcttgttggtgaacctatcatgtatcctgagattaattcactcctagatgagctg
catcgaaggcggatttctacttttctagtcacaaatgctcagtttcctgaaaagatcaaa
atgctgaaccccattacgcagttatatgtaagtgtggatgctgctactaaagaaagtttg
aaggcaattgacaggccactttttggggatttttgggagcgattcattgattccttgact
tctctcaaggataaacagcaacgaactgtttatcgccttactctggtgaaaggctggaat
acagaagatattgatgcttattataacatttttagccttggtagtcctgattttgttgaa
atcaagggagttacatactgtggaacgtctgctacatcaaagttgacaatggagaatgtg
ccctggcatgccgatgttaaaacattttcagaggccttagctttgaaaagtaacggggag
tatgaggttgcatgtgagcatgtccactcttgttgtgtcctcctggctaaaactagcaag
ttcaagatcaatggccagtggttcacatggattgactatgaaaagtttcacgatctggtg
gcttctggaaaaccttttgacagtaaggattacatggctccaacaccttcatgggccgtg
tatggggcagatgaaggtggatttgatccgtaccagtctcgatacaagaaagagcgccat
cacagaccaaaccagtga
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