Malus domestica (apple): 103442965
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Entry
103442965 CDS
T03194
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103442965
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103442965
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
DUF6520
Motif
Other DBs
NCBI-GeneID:
103442965
NCBI-ProteinID:
XP_008379967
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Position
9:complement(9322279..9324526)
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AA seq
400 aa
AA seq
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MDLKLKSILPMFVFMLLVSTSNAKSSIYDVTSAKYGGKANSDISQAFSKAWTDACASTLA
SKIVVPRGTYKFVGATFKGPCKAPIEIQLQGTLQAPADGSKLPKADTWVGFERIDGLTLS
GGGTFDGQGATAWKQNDCNKNKNCKSIAINLRFNFVTNSIIRDITTKDSKNFHVNVLGCN
NVVFQHFTVSAPKESMNTDGIHIGRSTGINITDSTIGTGDDCISIGDGTKQLHVTKVTCG
PGHGISIGSLGRYQNEEPVSGIFIKNCTIKNTDNGVRIKTWPASPSNGVVSDVHFEDIIM
DNVGNPVIIDQEYCPWNQCTLKVPSKVKISNVSFKNIKGSSSTPVGIKIVCSGGLPCENV
QLSDIDLTYSGNKGPITSQCKHVKPTINNVARALACATSS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaattgaaaagtatcttgcccatgtttgtgttcatgttgttagtatccaca
tctaacgccaaatccagtatctatgatgtcactagtgcaaaatatggtggaaaggcaaac
tctgatatatcccaggcttttagcaaagcttggacagatgcatgtgcatcgacattggca
agtaaaattgttgttccaagagggacatacaagtttgtaggggcaactttcaaaggacca
tgcaaagctcctattgagattcagctccaaggcacactgcaggctccagcagatggcagc
aaactcccaaaagcagatacctgggtaggttttgagcgcattgatgggctcaccttatcc
ggtggtggaactttcgatggccaaggagcaactgcttggaagcaaaatgattgcaacaaa
aacaaaaattgcaaatctattgctatcaatctgaggttcaattttgtcaccaattccata
attcgggacataacaacaaaagacagcaaaaatttccacgtcaatgttttgggttgcaac
aatgtggtattccaacattttaccgtctcagcgcctaaagagagcatgaacacagatgga
attcatatcggacgttcaactgggatcaacatcacagattcaaccattggaacaggggat
gattgcatctctataggtgatggcaccaagcaactccatgtaaccaaagttacttgcgga
cccggccatggcataagcatcgggagtctcggaagatatcagaatgaagaacctgtgtcc
ggaatctttatcaagaactgcacaattaaaaatacagataatggtgtgagaatcaaaaca
tggcctgcttctccatcaaatggtgtagtctcagatgttcactttgaggatattattatg
gacaatgttggaaaccctgtcatcatagaccaagagtattgtccatggaatcagtgcaca
cttaaggttccatccaaagttaagatcagcaatgtcagcttcaaaaacataaagggctca
tcttcaaccccagtcggtattaagattgtatgcagtggagggctgccatgtgagaatgtg
caactaagtgacattgatctcacatacagtggaaacaaaggccctattacctctcaatgt
aagcatgtcaagcccaccattaacaacgtggcacgggctcttgcttgcgcgacctcttct
tga
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