Malus domestica (apple): 103453820
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Entry
103453820 CDS
T03194
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103453820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103453820
03041 Spliceosome [BR:
mdm03041
]
103453820
03032 DNA replication proteins [BR:
mdm03032
]
103453820
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103453820
Spliceosome [BR:
mdm03041
]
Complex A
U1 snRNP components
Sm proteins
103453820
U2 snRNP components
103453820
Complex B
U1 snRNP components
103453820
U4/U6.U5 tri-snRNP components
103453820
Complex C
U2 snRNP components
103453820
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103453820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF6454
Motif
Other DBs
NCBI-GeneID:
103453820
NCBI-ProteinID:
XP_008391624
LinkDB
All DBs
Position
13:complement(27419328..27423015)
Genome browser
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSTDAYMNLQLANTEEYIDGQSTGNL
GEILIRCNNVLYLHGVPEDEEIEDAERE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctacaataccagttaacccaaagccgttcttgaataatctgactggaaagactgtc
attgtgaaacttaaatggggaatggagtacaaaggttttcttgtctcgacagatgcctat
atgaacttgcagttggcaaacactgaagaatatattgatgggcaatccactggaaatctt
ggagagattttgataagatgcaataatgttctttatcttcatggggtgccagaggatgaa
gaaattgaagatgctgaacgggaatga
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