Malus domestica (apple): 103453871
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Entry
103453871 CDS
T03194
Name
(RefSeq) TATA-box-binding protein 1 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103453871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103453871
03021 Transcription machinery [BR:
mdm03021
]
103453871
Transcription factors [BR:
mdm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
103453871
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103453871
RNA polymerase III system
TFIIIB
103453871
RNA polymerase I system
SL1/TIF-1B
103453871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
103453871
NCBI-ProteinID:
XP_028948203
LinkDB
All DBs
Position
14:complement(334518..338991)
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AA seq
220 aa
AA seq
DB search
MGDQGGLEESQPVDLSIHPSGIVPTLQNIVSTVNLDCKLDLKQIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKVSVECLQIGINIAKNIVIYYARI
IQKLGFNAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKI
VLLIFVSGKIVITGAKVRDDTYKAFENIYPVLTEFRKVQQ
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcaaggtggattagaagagagccaacctgtggatctttccattcacccctct
ggcattgttcccactcttcagaatatcgtatctacagttaacttggattgtaaattggat
cttaagcaaattgcgttgcaagctcgaaatgcagagtacaaccccaagcgttttgctgct
gtaattatgagaataagggagcctaaaactacagctttgatttttgcctctgggaagatg
gtatgcactggtgcaaaaagtgaacagcaatcaaaactggcagcgaggaaggtatctgtt
gaatgcttacagattggtattaacatagcaaaaaacatagtgatatattatgcccgaatc
atccagaagcttgggtttaatgctaagttcaaggatttcaagattcaaaatattgttggc
tcctgtgatgttaaattcccgataagacttgagggtcttgcatactcccatggtgccttt
tcaagttatgagccagagcttttcccggggctgatatatcgaatgaagcagccgaagatt
gttcttcttatatttgtgtcagggaaaattgttattacgggtgcaaaggtgagggatgac
acatacaaggcctttgaaaacatataccctgtccttacagagttcaggaaggtccagcaa
tga
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integrated database retrieval system