Malus domestica (apple): 103454327
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Entry
103454327 CDS
T03194
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
mdm
Malus domestica (apple)
Pathway
mdm03030
DNA replication
mdm03410
Base excision repair
mdm03420
Nucleotide excision repair
mdm03430
Mismatch repair
mdm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103454327
03410 Base excision repair
103454327
03420 Nucleotide excision repair
103454327
03430 Mismatch repair
103454327
03440 Homologous recombination
103454327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdm03032
]
103454327
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103454327
DNA replication proteins [BR:
mdm03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103454327
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103454327
MMR (mismatch excision repair)
DNA polymerase delta complex
103454327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
103454327
NCBI-ProteinID:
XP_008392150
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All DBs
Position
14:complement(6042190..6047945)
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AA seq
442 aa
AA seq
DB search
MEAMEIDSEKNLHRKHSTYKLLDERFGIQKEMYRGQQYSQIYFARLHMMRTLLYSLVPNW
KPHLPVCRVLGSERDKECIIVGTLYKHMKLKPCVLDEYSKTRTVTPLVKPHNFVHPDDHL
ILEDESGRVKLSGNVLSPSVYVTGTIVGLHGKETDAGDFFVLDVLEAGLPPQIELPLKSR
EGKYVVFVSGLRVGSSSLNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSIEVPH
GLLNGQNLASKDQSRLSEPIKELDILLTQIAAGLSLDIMPGIYDPANFALPQQPLNRCLF
PGSSAYNTFRSCTNPHCFDLDDVRFLGTSGQNIDDLDKYSEATDKLDFIERTLRWRHLAP
TAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYDSRLVKGSDGQMVRLISIPKFCETGV
AVVLNLGNLECHTLSFGTQFSS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaaatcgattcggagaagaacctccacagaaagcattccacctacaaa
ttgctggacgagaggtttgggattcagaaggaaatgtacaggggtcaacagtacagccaa
atatacttcgcccgcctccatatgatgaggacccttctctattcccttgtccctaactgg
aaaccccatttgccagtttgcagagttttgggatcggaaagggacaaggaatgcatcatt
gttggaaccctctacaagcacatgaaactcaagccttgtgttcttgatgaatactctaag
acgagaactgtgacaccacttgtcaagcctcataattttgtgcacccagatgaccatctg
attttggaagatgaaagtggaagagttaagctttctgggaatgtgctttcaccttctgtg
tatgtaacagggactattgttggtttacatggaaaggagactgatgccggtgacttcttt
gtcctagatgttcttgaagctggattaccaccccagatagagttgccacttaaatcaaga
gaaggcaaatatgttgtttttgtatctggacttcgtgtcggaagcagctctttaaaccct
ctccagtttcagcttctcgttgatcatataacaggacatttaggagatgagaaggaacaa
ggtattgcagcacagatagttcatgttgtaattgctggaaattctattgaggttcctcat
ggacttcttaatggacagaatttagcgtcaaaggatcaatcaaggctgtctgagccaatt
aaggagctggatattttgttgactcagattgctgcaggtttgtctttggatatcatgcct
ggtatctatgaccctgctaattttgccttgccacagcagcctttgaacagatgccttttc
cctggttcatcagcttataacacgttcagatcatgtaccaatccccattgctttgatctt
gatgatgtcaggtttcttggaacatcggggcaaaatatagatgatcttgataagtattca
gaagcaacggataaacttgactttattgaaaggacattgaggtggaggcatctggcacca
acagcacctaatactcttgggtgctatcctttcacggatagggatccgttcctgatcgag
agttgtcctcacgtttactttgttggtaatcaggataaatatgatagtcgcttagtaaag
ggatctgatggtcagatggtgagactcattagcatacctaaattctgtgagacgggagtt
gctgttgtgctaaacttggggaatcttgaatgccatacactcagtttcgggactcagttc
agctcataa
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