Methylomonas denitrificans: JT25_016050
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Entry
JT25_016050 CDS
T04191
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JT25_016050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdn03400
]
JT25_016050
Enzymes [BR:
mdn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JT25_016050
DNA repair and recombination proteins [BR:
mdn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JT25_016050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
AMK77973
UniProt:
A0A126T7A2
LinkDB
All DBs
Position
complement(3464803..3465642)
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AA seq
279 aa
AA seq
DB search
MDKATRLQYLEAMGIDVWVSRHPPITVQALQAVDDESNHVEWADDCRDAGGRAMSGAIAE
HREAHRSHHDEPSEIDERWASFHEAHATHPALANEQIWKDLQHQVSLCRACSLCETRTQT
VFGVGNKQATWMLIGEAPGQNEDLQGEPFVGKAGQLLTEMLRAIGLKREEVYIANMLKCR
PPNNRDPESEEVAACNHFLQRQIELLQPKIILAVGRIAAQNLLKTQQPLAKLRGVRHQLD
GIPLIVIHHPAYLLRSLLEKAKAWSDLQFALSVYQKLEK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggataaggcaacccgcttacagtatttggaggcgatgggcatcgatgtctgggtttcc
agacatccgcccatcaccgttcaagcgttgcaagcagtggatgacgaatcaaatcatgta
gaatgggctgacgactgcagggatgcaggaggtagggcaatgtcgggagcaattgccgaa
caccgtgaagcccatcgatcccatcatgacgaaccctcagaaatcgatgaacgttgggct
tcgtttcacgaagcccacgctacgcatcccgccctcgccaacgaacaaatctggaaagac
ctgcaacaccaagtttctctatgccgcgcgtgctcattgtgtgaaacccgcacccaaacc
gtgtttggcgtcggcaataaacaagcgacctggatgctgatcggcgaagcccccggccag
aacgaagacttgcaaggcgaacccttcgtcggcaaagcaggacaattgctgactgaaatg
ctgcgggcgataggtttgaaacgcgaggaagtctacatcgccaatatgctgaaatgccgg
ccgccgaacaaccgcgatccggaaagcgaagaagtcgccgcgtgcaaccactttctgcaa
cgacaaatcgaattgctacaaccgaaaattattttggcggtgggccgcattgccgcgcaa
aacttgctcaaaacccagcaacctctggcaaaattacgcggtgtccgccaccaactggat
ggcataccgttaattgtcattcaccacccggcttacttattacgttcattgctggaaaaa
gccaaggcctggagcgacttgcagtttgcactgtcggtctatcaaaaactagaaaaataa
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