Monodelphis domestica (gray short-tailed opossum): 100012006
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Entry
100012006 CDS
T01031
Symbol
ERCC2
Name
(RefSeq) ERCC excision repair 2, TFIIH core complex helicase subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03022
Basal transcription factors
mdo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100012006 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
100012006 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdo03021
]
100012006 (ERCC2)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100012006 (ERCC2)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100012006 (ERCC2)
Transcription machinery [BR:
mdo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100012006 (ERCC2)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100012006 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
100012006
NCBI-ProteinID:
XP_007492210
Ensembl:
ENSMODG00000021549
UniProt:
F7DF10
LinkDB
All DBs
Position
4:397460071..397472080
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVHFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTISLLALIVAYQ
RVHPLEVTKLIYCSRTVPEIEKVIEELRKLMNSFEKQEGEKVPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQRQQDSSVPHCRFYEEFDAQGRQMPIPWGIYNLDDL
KAFGRQKGWCPYFLARYSILHANVIVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQNNLETLQRTVHKIKETDEKRLREEYRRLVEGLREASVARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRTQHVVQESPPAFLGG
LAHRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLSNFATLVSTYSRGFTIIIEP
FDERTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLEIYPKILDFHPVTMAT
FTMTLARVCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVAAWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEFLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaatgtggatgggctcctggtccacttcccttatgactacatctaccctgag
cagttctcctatatgctggagctcaagcggaccctggatgccaagggtcatggagtcctt
gagatgccctcaggcactggcaagactatctccctcctggccttaatcgtggcataccag
cgggttcaccccctggaagtgaccaagctcatctattgctccaggactgtcccagagatt
gagaaggtgatagaagagctcaggaagctgatgaactcctttgagaagcaggaaggagag
aaggttcctttcctgggcctggccttgagctcacggaagaatctgtgtattcaccctgag
gtgacccccttgaggtttgggaaggatgtggatggaaagtgtcatagcctgacagcttct
tatgtgcgggcccagcgccagcaggactccagtgtccctcactgccgattctatgaggag
tttgatgcccaaggtcgccaaatgcccattccctggggcatatacaacctggatgatctg
aaggcttttggacgacagaaaggctggtgtccatacttcctggcccgatactcaattctt
catgccaatgtgatcgtctatagctatcactaccttctggacccaaagattgctgacctt
gtttccaaagagctggctcggaaagccgtggttgtttttgacgaggcccacaacattgac
aacgtatgcatcgactcaatgagtgtgaatctgacccgccggaccctggaccgatgccag
aacaacttggagacgctgcagcgcacggttcacaagatcaaggagactgatgagaaacgc
ttacgggaagaataccgccgcctagtggaggggcttcgggaggccagtgttgcccgggag
acagatgcccacctggccaacccagtccttccagatgaagtattacaggaggcggtcccc
ggctccatccgaacagctgagcatttcctgggcttcctccggcgcctgctggaatatgtc
aaatggcgtctgcggacccagcatgtggtccaggagagcccaccggccttcctggggggc
ctggcccatcgtgtctgcatccagcgcaagccattgcggttctgcgctgagcggctgagg
tcgctacttcacacactcgagatcgcagacttggcagacttctccccgctcaccctcctc
tcaaattttgccaccctggtcagcacctactcccgaggcttcaccattatcatcgaaccc
ttcgacgagaggaccccgaccattgccaaccccgtcctacatttcagctgcatggatgcc
tccctggccatcaaacctgtgtttgagcgttttcagtctgtgatcatcacgtcagggacg
ctgtcccctttggagatctatcccaaaatactggacttccacccagtcaccatggccacc
ttcactatgaccctggccagggtctgcctctgccccatgattgttggccggggcaatgac
caggtggccatcagctccaagtttgagacccgagaggatatagctgtcatccgcaattat
gggaacttgctcctggagatgtccgctgtggtgcccgatggcattgttgccttcttcacc
agctaccagtacatggagagcaccgtggctgcctggtatgagcagggcatcctggagaac
attcagaggaataagcttctgttcattgagacgcaggatggagcagagaccagcgtggct
ctggagaagtaccaggaggcctgtgagaatggccggggtgccatcctactgtctgtggct
aggggcaaagtgtccgagggtatcgacttcgtccaccactatggccgggccgtcatcatg
tttggtgtcccctatgtctacacccaaagccgcatcctcaaggcccgcctggagttcctt
cgggaccagttccagatccgagagaatgatttcctgacctttgatgcgatgcggcatgca
gcacagtgtgtgggccgggccatccggggcaaaactgactacgggctcatggtctttgcc
gacaagcgcttcgcccgggctgacaagcgagggaagctcccccgctggattcaggagcac
ctcactgacgcaaatctcaacctgactgtggatgagggggtgcaggtggccaagtacttc
ctgaggcagatggcccagcccttccacagggaggaccagctgggcctgtctctgctgagc
ttggagcagctgcagtctgaagagaccctccgccgcatcgagcagatcgcccagcagctg
tga
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