Monodelphis domestica (gray short-tailed opossum): 100012301
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Entry
100012301 CDS
T01031
Symbol
LMO7
Name
(RefSeq) LIM domain 7
KO
K06084
F-box protein 20
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100012301 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdo04121
]
100012301 (LMO7)
Ubiquitin system [BR:
mdo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100012301 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
PDZ
LIM
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100012301
NCBI-ProteinID:
XP_007501523
Ensembl:
ENSMODG00000001099
LinkDB
All DBs
Position
7:135373326..135614806
Genome browser
AA seq
1622 aa
AA seq
DB search
MEGREDAESNCDVAFAEAQRWVEAVTEKNFENKDFRASLENGVLLCDLINKLKPGIIRKI
NRLSTPIAGLDNINVFLKACEKIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLIT
LYWLGRKAQSDPYYNGPYLNLKAFENLLGQALTKALEDSSSLKRSGRDSGYGDIWYTERG
EFLSPSAYHKRDDSFDSLDSFGSRSFTSCSSDLTLKGGSEGCESDTDSELTFKMQDYNKD
DMSYRRISVVEPKSALPFNRFLPNKSRQPTYVPAPLRKKRPDKNEDNRRSWASPVYTEAD
GTFSSQFLLLQALQTYSDDILSSETKTKIDPTSGPRIITCRRNVFYAPGYRRDDAENVVL
DPDLENDDYFVRKTGAFHANPAVLQAFEDFRRFSVPDDFIERDIILQQREGEPVLPDLEK
DDMIVRRIPAQKKDVPLSGAPDKYHPVPFPEPWTLPPEIRARFLCVLERTSSSKEKNNSC
RVLVPSSCQKKDDMLTRKIESWKLGTTIPPISFTPGPCSEEDLKKWEAIRAASKVRHKKR
QMVERLFQKISDENGSKSLSDITAEDVHSLRQLRYEEMQKIKSQLQEQDQQWQDDLAKWK
NRRKSYTSDLQKKKEEREEIEKQSLERSERSAKTFREILQDRETRNQETNSHRQKTVDPE
SMYSSTDEIFNETKVFPAVTLTREGYQNEIREKEVTYGTESDKEDSSTLAKMEDYKTAEI
QVPSQSLTEKQSSVSALSSNHSLNTQMGPARVSASLPRSYQKTDTSRLTSVVTPRPFGSQ
SRGISSLPRSYTMDDAWKYNGDIEITKRIPESSSGSFSKSDDSQLYSSSALKNVEEAREN
EKAVPSSTSLYLPISQERESFPKSEQSLISDPLPVSESFEGRTSSSPEPLRTKDQFSDMR
IIMIHSPGNSDADFGFTVRWDFPGIIVQSVEAGSPAALSQLQVDDEIIAVNNTTFSNKDT
DKWEEIMANARETGNLVVDVRRYGKNDWGKDQPSLPFIRHKTLNLTSMATKIIGSPETKW
IDATSGVYSSDMTSNISIQSDFSESLQNSNIETKGINGISVENSSMEPKASEPISLKNLK
RRSQFFEQGSSDSVVPDLPVPTINAPSRWAWDQEEERKRQEKWQKEQDRLLQEKYQREQE
KLREEWQRAQQEAEKESSKYLNEEQMALNSNNISLTSREPTFANWETSWREEIYSSDREK
TRAEEEERLHHEEQKRKLEEQLLLEKERKIKELEELEQKQRAEIEQQRRQAEIEQQRRQA
EIEQQRRQAEIEQQRRQAEIEQQRRQAEIEEQRRMAEIEEQRRRAEIEEQKRRAEIEEQK
RRAEKEKETSVQIYQYKRPVDPFEVTKRGDESTNLLPSDRNKSRSTTELDHTTSRNGSNK
YLDRIGNSGYSQKGSRKEQITSEAEMERQQILQEMRKKTSLHNDNSWIRQRSSSVTKEPI
CLPGIMRRGESLDNLDSPRSNSWRQAPWMNQSAGFHTSSSVQDFSRPPPQIVSTSNRAYM
RNPSSSFLPSSVGSLRTGTLSSAPSPAPRTQSPSTSQSGMQQRNRSVSGKRVCSYCNNIL
GKGAAMIIESLGLCYHLHCFKCVACQCDLGGSSSGAEVRIRNNELYCNECYLRFKSGQPT
SM
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggaagggagagaagatgcagagtccaactgtgatgtagcattcgctgaagctcagaga
tgggtggaggcagttactgagaaaaactttgaaaacaaagattttcgagcatctctagaa
aacggtgtcctgttgtgtgatttgattaataagcttaaacctggaattattaggaagatc
aatcgtttatctacaccaatagcaggtttggataatataaatgtttttctgaaagcttgt
gaaaagattggattgaaggaagctcagcttttccatcctggggatctacaggatttatcg
aatcgagtcacggtcaagcaagaagagactgatagaagagtgaaaaatgttttgattacc
ttatattggctgggcaggaaagcacagagtgacccttattataacggtccttaccttaat
ctgaaagcatttgagaaccttttaggacaagctttgactaaggcccttgaagactccagc
agtctgaagaggagtggcagagacagtggctacggagatatttggtatactgaacgtgga
gaatttcttagtccttcagcctaccacaaaagagacgattcctttgatagcttggattct
tttgggtctaggtcattcacgagctgttcatcagatttaactctgaaagggggcagtgaa
ggttgtgagagtgacacagattctgaactcacattcaaaatgcaggattataacaaggat
gacatgtcctatcgaaggatatcagttgttgagcccaaatctgctctaccattcaatcgc
tttttacccaacaaaagtagacagccaacctatgtgcctgcaccactgaggaaaaaaagg
ccagacaagaatgaggataatcgaagaagttgggcaagtcctgtatacactgaagctgat
ggaaccttctcaagtcagtttttattacttcaggccttacaaacatattctgatgacatc
ttgtcttctgaaacaaagaccaaaattgatcccacatctggcccaaggatcataacatgt
cgaaggaatgtcttttatgccccaggctacagaagagatgatgctgaaaatgtcgtatta
gatcctgacttagaaaatgacgattactttgttaggaagacgggggctttccatgcgaat
cctgctgttctccaggcttttgaagattttagaagattctctgtcccagatgatttcata
gagcgagatataatcctgcaacaaagagaaggtgaaccagtgcttccagatctagaaaaa
gatgacatgattgttcgcagaattccagcgcagaagaaagatgtgcctttatcaggagcc
ccagataaataccatccagtcccctttccagaaccttggactctcccaccagaaatccga
gccagatttctctgtgttcttgaaaggacatcctcatcaaaagaaaaaaataatagctgt
agagtcttagttccatcttcttgtcaaaagaaggatgatatgttgactcgtaagattgag
tcctggaaactagggacaacgataccacccatcagttttactcctggtccatgcagtgaa
gaggacttaaaaaaatgggaggctattcgagcagccagcaaagttaggcacaagaaacga
cagatggttgagagactctttcaaaagatttctgatgagaatgggagtaaatccttgagt
gatatcactgcagaggatgtacacagcttgcgccaactgcgttatgaagaaatgcagaaa
ataaaatcacaactgcaagaacaagaccagcagtggcaggatgacctagcaaaatggaaa
aatcgtcgaaaaagttatacttcagatctgcagaagaaaaaggaagagagggaagaaatt
gaaaagcagtctcttgagaggtctgagaggagtgcaaaaacatttagagaaattcttcag
gacagggaaaccagaaaccaagaaaccaacagtcatcggcagaaaacagttgatcctgag
agtatgtattcatctactgatgagatattcaatgaaacaaaagtatttcctgcagtgact
ttgactagagagggttaccagaatgagataagagagaaggaagtgacttatggtacagag
agtgataaagaagattcttcaacccttgcaaagatggaggactataaaacagctgaaatt
caggttccttctcaaagcctgacagagaaacagagctcagtctcagctttgtcttctaac
cattcactgaatacacaaatgggacctgctcgggtttcagcatctctccccagaagttac
cagaaaactgatacatctaggttaacatcggtggttacgccaagaccttttggttctcag
tcaagagggatctcatcgcttcccagatcctatacgatggatgatgcttggaagtacaat
ggggatatagaaatcactaaaagaattccagaaagttcaagtggttctttctcaaaatca
gatgacagccagctttactcaagctcagccttaaaaaatgttgaagaagcaagagaaaat
gagaaggcagtgccatcttctacatccttgtatttgcccatttcccaagaacgtgaatct
tttcctaaatcagaacagtctttaatatcagaccctttaccagtttctgagtctttcgaa
gggagaacctcttcatcaccggaacctttaaggacaaaggatcagttcagtgatatgaga
atcattatgatccacagccctgggaatagtgatgctgactttgggtttacagtaagatgg
gattttcctggaatcatcgtgcaatcagttgaagcaggtagccctgcagcattgtctcag
ctgcaggtagatgatgaaattattgctgttaacaacaccacgttttcaaataaggacaca
gataagtgggaggagatcatggctaatgcacgagaaactggaaacctagttgtggatgtc
aggcgttatggaaaaaatgactggggcaaagaccaaccttccctgccatttatacggcac
aaaaccctcaatctcaccagtatggctaccaaaattataggttcacctgaaactaaatgg
attgatgcaacttctggagtttacagttcagacatgacttcaaacatttcaatacagagt
gatttctctgaaagtcttcaaaattccaatattgaaacaaaaggaataaatggcataagt
gttgaaaacagctctatggaacccaaagcttctgaacccatttctttgaaaaacttaaaa
aggcggtcacaattttttgaacaaggaagttctgattctgtggtgcctgatcttccagtt
ccaaccattaatgctccaagtcgttgggcttgggatcaagaggaagagaggaaaagacag
gaaaaatggcagaaagaacaggatcgtttgcttcaggagaagtatcaacgtgaacaggaa
aaactgagggaagaatggcagagggctcaacaagaggctgagaaagaaagctcgaagtac
ttaaatgaggaacagatggcattaaactcaaataatatttctctcacctcacgtgagcca
acttttgccaactgggaaacaagttggagagaagaaatttattcttcagatagagaaaaa
accagagcagaggaagaagaaagacttcatcatgaagaacaaaagagaaaactagaagaa
cagcttctccttgagaaagaaaggaaaataaaggaattggaagaactggagcagaagcag
agggcagagatagagcaacagaggcgacaggcagagatagagcaacagaggcgacaggca
gagatagagcaacagaggcgacaggcagagatagagcaacagaggcgacaggcagagata
gagcaacagaggcgacaggcagagatagaagaacaaaggagaatggcagagatagaggaa
caaaggagacgggcagagatagaagagcagaaacggcgggcagagatagaagagcagaaa
cgacgagcagagaaagagaaagaaacttcggtgcaaatttatcagtataaaaggcctgtt
gatccctttgaagtaacaaagcgaggagatgagtcaacaaatctacttcctagtgacagg
aataaatcaaggtctaccactgaattggatcacaccacaagtagaaatgggagtaacaaa
tatttggaccggattgggaattcggggtattcacagaaaggttctcgaaaagagcagatc
acatcagaagctgagatggagagacagcaaatccttcaagaaatgaggaagaagacctct
ctccacaatgacaacagctggatcagacagcggagttccagtgtcaccaaggaacccatc
tgcctgcctggcatcatgagaagaggtgaatctctagataatttagactccccaagatca
aattcatggagacaagccccttggatgaatcagtcagctggcttccatacttcttcatct
gtgcaagacttcagccgtccacctccacaaattgtttctacatctaaccgtgcttacatg
cgaaatccatcttccagtttcctaccttcttctgttggttctctacgaactggaacttta
tcatctgcaccttccccagcacctcgaacacaatccccctctacttctcagtcagggatg
cagcaaagaaacaggtcagtcagtgggaagagagtatgctcctactgtaataacattctg
ggcaagggagcggccatgatcatcgagtctttggggctttgttatcatttacattgtttt
aagtgtgttgcctgccagtgtgatctcggaggctccagctcaggagcagaagtcaggatc
cgaaataatgaattgtactgcaatgagtgctatctccgattcaaatctggacagccaacc
tccatgtga
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integrated database retrieval system
