Monodelphis domestica (gray short-tailed opossum): 100016999
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Entry
100016999 CDS
T01031
Symbol
SOX1
Name
(RefSeq) SRY-box 1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdo03000
]
100016999 (SOX1)
Transcription factors [BR:
mdo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100016999 (SOX1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100016999
NCBI-ProteinID:
XP_007501341
Ensembl:
ENSMODG00000004267
LinkDB
All DBs
Position
7:complement(79610632..79615176)
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AA seq
394 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLTGQTGAGGGGGGGGGGGGGGGGSNKANQDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYSLAGGLLTAGAGGGGPAVGVGMGVGVSPAGVGQRLESPGGTAS
GGYAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGAGGAHHHPHAHPHHPHHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLSYGAAAAAAAAAGGPHQNSAVAAAAA
AAAASSGALGALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAASAA
AAAAAAAQSRLHSLPQHYQSASTGVNGTVPLTHI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaaacggacttgcattccccgggtggggcccaggcccccacg
aacctaacgggccagaccggggctggcggaggaggcgggggcggcggcggcggcggagga
ggaggaggaggcagcaacaaggccaaccaggatcgggtcaaacggcccatgaacgctttc
atggtatggtcccggggccagcggcgcaagatggcccaggaaaaccctaagatgcacaac
tccgagatcagcaagcggctgggggccgagtggaaagtcatgtccgaggcagagaagcgc
cctttcatcgacgaggcgaagcgtctacgggctctgcacatgaaggagcacccggattat
aaataccggcctcggcgaaaaaccaagaccctactcaaaaaggacaagtactcgctggcc
gggggcttgctgacggctggagccggaggtgggggcccggcggtcggggtgggcatggga
gtgggagtgagccctgcaggggtgggccagcggctggaaagtcccggaggcacggcgagt
gggggctatgcgcacatgaacggctgggccaacggagcttacccgggctcggtggcggcg
gcggctgccgcggcggcgatgatgcaggaagcgcagctcgcttacagccaacacccgggc
gctgggggagcgcaccatcatccacatgcgcacccccaccacccccaccaccctcacaac
ccgcagcctatgcaccgctacgacatgggcgcacttcaatacagccccatctccaattcc
cagggctacatgagcgcctcgccctcgggctacgggggcctctcctatggcgccgcggct
gccgcagccgctgccgcgggcggcccacaccagaactcggctgtggcggcagcggcagct
gcggcggccgcgtcgtcgggcgccttaggcgcgctgggttctctggttaaatccgagccg
agtgtcagccctccggtcacctcgcactcgcgggctccatgccccggggacctgcgcgag
atgataagcatgtacttacccgccggggaaggaggagaccccgctgccgcgtcggcggca
gcggcagccgcggcggcggctcagagccggctacattccctgccccaacactaccagagc
gccagcactggagtcaatggcactgtccccttgacacacatctag
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