KEGG   Monodelphis domestica (gray short-tailed opossum): 100019354
Entry
100019354         CDS       T01031                                 
Symbol
COL1A1
Name
(RefSeq) collagen type I alpha 1 chain
  KO
K06236  collagen type I alpha
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04151  PI3K-Akt signaling pathway
mdo04510  Focal adhesion
mdo04512  ECM-receptor interaction
mdo04611  Platelet activation
mdo04820  Cytoskeleton in muscle cells
mdo04926  Relaxin signaling pathway
mdo04933  AGE-RAGE signaling pathway in diabetic complications
mdo04974  Protein digestion and absorption
mdo05146  Amoebiasis
mdo05165  Human papillomavirus infection
mdo05205  Proteoglycans in cancer
mdo05415  Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100019354 (COL1A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100019354 (COL1A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100019354 (COL1A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100019354 (COL1A1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    100019354 (COL1A1)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100019354 (COL1A1)
  09154 Digestive system
   04974 Protein digestion and absorption
    100019354 (COL1A1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    100019354 (COL1A1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100019354 (COL1A1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100019354 (COL1A1)
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    100019354 (COL1A1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100019354 (COL1A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mdo00536]
    100019354 (COL1A1)
Glycosaminoglycan binding proteins [BR:mdo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100019354 (COL1A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 100019354
NCBI-ProteinID: XP_001367735
Ensembl: ENSMODG00000011945
LinkDB
Position
2:complement(203583932..203612085)
AA seq 1455 aa
MFSFVDPRLLLLLAVTAVLTHGQDEEDIPEGTCIQNAIKYNNGEVWKPKICQICVCDNGS
ILCDEIICEDVSNCPNVQYKDDECCPSCLGADAVASPSSLTEIGVEGPKGDTGPRGERGP
PGLPGKDGKPGNPGIQGPPGLPGIPGLGGNFASQMSYGYDEKSGGGMSVPGPMGPSGPRG
LPGPPGNPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGPPG
PQGARGLPGTAGLPGMKGHRGFSGLDGAKGDSGPAGPKGEPGSPGENGAPGQMGPRGLPG
ERGRPGPPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSEGPQG
VRGEPGPPGPAGAAGPSGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGAPG
PKGNSGEPGAPGNKGDPGAKGEPGPVGVQGPPGPAGEEGKRGSRGEPGPSGLPGPAGERG
GPGSRGFPGADGVAGPKGAPGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPG
PDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVG
AAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDAG
APGPSGARGERGFPGERGVQGPPGPQGPRGSNGAPGNDGAKGDAGAPGAPGGQGPPGLQG
MPGERGAAGLPGAKGDRGDAGPKGADGAAGKDGVRGLTGPIGPPGPAGPTGDKGESGPSG
PVGPTGARGAPGERGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTG
APGPAGNVGAPGPKGARGNAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKG
PRGETGPIGRPGEVGPPGPPGPSGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRG
ERGFPGLPGPSGEPGKQGPSGISGERGPPGPAGPPGLAGPPGESGREGSPGAEGSPGRDG
SPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPTGARGPSG
PQGPRGDKGETGEQGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAG
ASGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPAGPPGPPSGGFDFSFLPQPPQEK
AHDSGRYYRADDANVRDRDLEVDTTLKSLTQQIENIRSPEGTRKNPARTCRDLRMCHSDW
KSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPKVPLKNWYINKNPKDKKHVWFGES
MTDGFQFEYGGEGSDPADVAIQMTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALL
LQGSNEIEIRAEGNSRFTYGVTEDGCTSHTGNWGKTVIEYKTTKTSRLPIIDVAPMDIGA
PNQEFGCDVGPVCFL
NT seq 4368 nt   +upstreamnt  +downstreamnt
atgttcagctttgtggatccccggctcctgcttctcttagcagtcactgccgtcctcacc
cacggccaagatgaagaagacattccagaaggcacctgtatacagaatgccataaagtac
aacaatggggaggtgtggaaaccaaagatctgtcaaatctgtgtctgcgacaatggaagc
atcctgtgtgacgaaataatctgtgaagatgtttccaactgccccaatgtgcagtacaag
gacgatgaatgctgcccctcctgccttggtgccgatgctgttgcttcaccatcctctctc
acagaaataggagtcgagggtcccaaaggagatactgggcctcgaggtgaaaggggaccc
ccaggcctacctggaaaagatggcaaaccaggaaatcctggtattcagggcccccctggt
ctccctggtatccctggccttggaggaaactttgcttcccagatgtcttatggctatgat
gagaaatcaggtggtggcatgtctgttcctggacctatgggtccctctggtcctcgtggt
ctccctggtcctcctggcaacccaggtccccaaggtttccaaggtccccctggtgaacct
ggcgagcctggagcttcaggtcccatgggtccccgaggccctgcaggtccccctggcaag
aacggagatgatggtgaagctggcaaacctggtcgtcccggcgaacgtggtcctcctggt
cctcagggtgctcgaggtctgcctggaactgctggtctccctggcatgaagggacaccgg
ggtttcagtggtttggatggtgccaagggagacagtggtcccgctggtcccaagggtgag
cctggtagccctggtgagaatggagctcccggacaaatgggccctcgtggtcttcctggt
gagagaggccgccctggacctcctggcccagctggtgctcgtggtaacgatggcgcaaca
ggtgctgctggacccccaggtcccaccggtcctgctggtccccctggtttccctggtgct
gttggtgctaagggcgaagctggtccccaaggatctcgaggctctgaaggtccccagggt
gtccgtggagagcctggtccccctggccctgctggtgctgctggcccatctggtaaccct
ggtgctgatggacaacctggtgccaaaggtgccaatggtgctcctggaattgctggtgct
cctggcttccctggtgcccgtggtccttctggacctcagggtcccagtggtgctcctggt
cccaagggtaatagtggtgaacctggtgctcctggtaacaaaggtgaccccggtgccaag
ggagagcccggccccgttggtgttcaaggacccccaggccctgcaggagaggaaggcaag
agaggatcccgtggtgaacctggaccttctggtctgcccggcccagctggtgaacgaggc
ggtcctggtagccgtggcttccctggtgctgatggtgtcgctggccctaagggtgcccct
ggtgaacgtggtgctcctggccccgccggtcccaaaggatctcctggtgaagctggtcgc
cctggtgaggctggtctacctggtgccaagggtctgactggaagccctggaagccctggt
cctgatggcaaaactggtcctcctggtcccgctggtcaagacggtcgccccggacctcca
ggcccccctggtgcccgtggtcaagctggtgtaatgggattccctggacccaagggtgct
gctggagaacctggcaaggctggagagagaggtgtccctggaccccctggtgctgtgggt
gctgctggaaaagatggagaagctggtgctcaaggtccccccggccctgctggtcctgct
ggtgagagaggtgaacagggtcctgctggttcccctggattccagggtctccctggccct
gctggccctcctggtgaagctggcaagcctggtgaacagggtgttcctggagatgctggt
gcccctggcccctctggcgcaagaggtgagagaggtttccctggagaacgtggcgtgcaa
ggtcctcccggccctcagggtccccgtgggtccaatggtgctcccggcaatgatggtgct
aagggtgatgctggtgctcctggtgctcctggtggccaagggccccctggtctgcaagga
atgcccggtgaacgtggtgcagctggccttcctggtgccaagggtgacaggggtgatgct
ggtcccaaaggcgctgatggtgctgctggcaaagatggtgtacgtggtctgactggtccc
atcggtcctcctggccctgctggtcctactggtgacaagggtgaatctggtcccagcggc
cccgttggtcccactggagctcgtggtgcccctggagaacgtggtgagcctggcccccct
ggtcctgctggctttgctggtccccctggtgctgatggccaacctggtgctaaaggtgaa
cctggtgatgctggtgctaaaggtgatgctggcccccctggccctgctggacccactggt
gcccctggccctgctggtaatgttggtgctcctggacccaaaggtgcccgtggcaacgca
ggtcctcctggtgctactggtttccctggtgctgctggaagagttggtccccctggcccc
tctggtaatgctggaccccctggacctcctggccctgctggcaaagaaggcggcaaagga
ccccgtggtgagactggccccattggacgtcctggtgaagttggacctccaggtccccct
ggcccaagtggagagaagggatctcctggtgctgatggccctgctggtgctcctggtact
cctggacctcaaggtattgctggacagcgtggtgtggtgggtctgcctggacagagagga
gaaagaggtttccctggtcttcctggcccctctggtgaacccggaaaacaaggtccttct
ggaataagtggcgaacgtggcccccctggccctgctggcccccctggattggctggaccc
cctggtgaatctggacgagagggctctcctggtgctgaaggctcccctggtcgggatggt
tctccaggccccaagggtgaccgtggtgagactggtcctgctggcccccctggtgctcct
ggtgcccccggcgctcctggccctgtaggtcctgctggaaaatctggagatcgtggtgag
actggtcctgctggtcctgctggtcctgttggtcccactggtgcccgtggaccttctgga
ccccaaggcccccgtggtgacaagggtgagacaggtgaacagggagacagaggcatgaag
ggtcacagaggcttctctggtctccagggtccccctggtcctcctggttctcctggtgaa
caaggtccttctggagcttccggtcccgctggcccccgaggtccccctggctctgctggt
gcttctggaaaagatggactcaatggtcttcctggccccatcggtccccctggtccccgt
ggtcgtactggagatgctggtcctgctggtccccctggacctcctggacccgctggtcct
cctggtccccccagtggtggattcgacttcagcttcctgccccagccaccccaggagaag
gctcacgactctggccgctattacagagctgatgatgctaacgtgcgtgaccgtgacctt
gaagttgacaccaccctcaagagcctgacccaacagattgagaacatccgaagccctgag
gggactcgaaagaaccctgcccgcacctgcagagacctcaggatgtgccactcagactgg
aagagcggagagtactggattgatcccaaccaaggctgcaacctggatgccatcaaggtc
ttctgcaacatggagactggagaaacctgtgtgtaccccacccaacccaaagtgcccctc
aagaactggtacattaacaagaaccccaaggacaagaagcacgtctggttcggcgagagc
atgaccgatggattccagttcgagtatggtggcgagggctccgaccctgctgatgtggct
attcagatgaccttccttcgcctgatgtccacggaggcctcccagaacatcacctatcac
tgcaagaacagcgtggcctacatggaccagcagaccggcaacctcaagaaggctctgctt
ctccaaggctccaatgaaattgagatccgtgctgaaggcaacagccgattcacctatgga
gtcactgaagatggctgcacgagtcacaccggaaactggggcaagacagtcatcgaatac
aagaccaccaaaacctcccgcctgcccatcatcgatgtggcccccatggacattggcgcc
cccaaccaggaatttggctgcgacgtgggtcccgtctgcttcctgtaa

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