Monodelphis domestica (gray short-tailed opossum): 100021074
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Entry
100021074 CDS
T01031
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04721
Synaptic vesicle cycle
mdo04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
100021074 (RIMS1)
04721 Synaptic vesicle cycle
100021074 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdo04131
]
100021074 (RIMS1)
Membrane trafficking [BR:
mdo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100021074 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
100021074 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
FYVE_2
PDZ_6
Nudix_N_2
Motif
Other DBs
NCBI-GeneID:
100021074
NCBI-ProteinID:
XP_007484242
Ensembl:
ENSMODG00000018557
LinkDB
All DBs
Position
2:323441861..324180671
Genome browser
AA seq
1628 aa
AA seq
DB search
MSSSSALGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKCVV
RDMAKPAARKAPRNAENQSHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGI
CLKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAW
FFGSGPQPPSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASQEITPSGVPP
ERSKGTELSQKTMGLEQKQISSRSRSEPPRERKKTSVTGEQNGKAGLKSERKRVPKSSLQ
QGEGLVEERDRKERREGRRLEKVRSQDLPEKREEGKGVEDEKQRKEEDYQTRYRSDPNLA
RYPVKPHPEEQQMRMHAKVSKARHERRHSDVSLPHTEMEESEVLENKLGKRAQPSGAQDR
KSLLETQRSYSIERTGDVRISVSKQLTNHSPPATRHGPVPTEHPESKNQDSFKKQSRLDP
SSAILIRKAKREKMETMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGA
STPEYTSCEDVEIESESVSEKGDLDYYWLDPTTWPSRETSPISSHPVTWQPSKEGDRLIG
RVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLE
WNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQK
MERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPR
NPYVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFLYSHVHRRDFRERMLEITVWDQPRV
QEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKL
QRSQRIIDSDISDYEVDDGIGVVPPVGYRSNTRESKSTTLTVPEQQRTAHHRSRSVSPHR
GDDQGRPRSRLPNVPLQRSLDEIHQVRRSRSPTRHHDASRSPVDHRSRDMDSQYLSEQES
ELLMLPRAKRGRSAECLHTTRHSVRHYKTLPSKMPLIENGTHWHIYSELQPSLDRARSAS
TNCLRPDTSLHSPERERQSRKSERSSNQKQTRKSNASDAERVLPQHLSRRGHPTPRTTDQ
PVIRGKHPSRSRSSEHSSIRTMCSIHHLAPGGSAPASPLLTRIHQQGSPGQSPPADTAFS
NRRGRQLPQVPIRSGSIEQASLVVEERTRQMKMKVHRYKQTTGSGSSQELDREQYSKYNI
HKDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISSFTPKMQ
GRRMGTSGRTITKSTSVSGEMYKLEHNDGSQSDTAVGTVGTGGKKRRSSLSAKVVAIVSR
RSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLI
FPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLT
QKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVW
GDYGRMDHKCFMGVAQILLEDLDLSSMVIGWYKLFPPSSLVDPTLAPLTRRASQSSLESS
TGPPCIRS
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcttctgctttgggcccccgaggccctcgcccacccacagtgcctccccct
atgcaagagctgcccgacctgagccacctgaccgaagaggagaggaacattatcatggca
gtgatggaccggcagaaggaagaagaagagaaagaagaggccatgctcaagtgtgttgtc
agggacatggcgaaacctgcagcccgcaaagcaccaaggaatgctgaaaaccagtcccac
caaccttcaccgagattgcatcaacaatttgaaagctataaagaacaagtgaggaaaatt
ggagaagaagcccggcgctaccaaggagagcacaaagatgatgcccctacttgtggtatt
tgtctgaaaacgaagtttgctgatggttgtggccatttatgttcttactgccggaccaag
ttctgtgccagatgtggagggcgggtttctctgcggtcaaacaatgaggacaaagtggtt
atgtgggtatgcaatttatgtcgaaagcaacaagaaatcttaaccaagtctggagcttgg
ttttttgggagtggtcctcagccaccaagtcaagacgggacactcagtgacacagctacg
ggtgcaggctctgaggtgcctagagaaaaaaaagccaggctacaggaaagatcgaggtct
cagactcccttaagcacagcagcagcctcccaggaaatcacaccttcaggggtcccacca
gagagaagcaaaggaacagaattgtcccagaaaaccatgggtctggaacagaaacagatt
tcatccagatccagaagtgaaccccctcgagaaaggaagaagacttcagtgactggtgag
cagaatggcaaagcggggctgaaaagtgagcgtaaacgtgtgccaaaatcctctctccaa
caaggggagggacttgtggaggagagggaccggaaagaaaggcgggaaggcagaaggctg
gagaaggtccggtcacaagatttgccagaaaagcgcgaggagggcaaaggagtggaggat
gagaaacaaagaaaagaagaagactatcagactcgataccgaagtgaccctaatctggca
aggtatcctgtcaagccccaccccgaggaacagcagatgcgcatgcatgccaaagtctct
aaagcccgccatgaaaggagacatagtgatgtgtctttgccccacacagaaatggaagaa
tcagaggtactggagaacaagttaggaaaacgggctcaaccctctggagctcaggatcgg
aaatcccttttggaaactcagaggtcatattccatagaaagaactggtgatgtaagaata
tctgtttctaaacaattaactaaccatagcccaccagctaccaggcatggccctgttcca
acagaacaccctgaatccaagaaccaagattctttcaaaaagcagagtcgcctggatcct
agctccgctattcttatccggaaagcaaagagagagaaaatggaaacgatgctaaggaat
gactccttgagctctgaccagtctgagtcagtacggccatctccgccaaagccccatcga
tccaagagagggggaaagaagagacagatgtctgtcagtagttctgaggaggaaggtgcc
tccacacctgagtacaccagctgtgaagatgtggaaatagaaagtgaaagcgtcagtgaa
aagggtgacttggattattactggctggatcctaccacgtggcccagtagagagacatct
cctataagttcgcatcctgtaacgtggcaaccatctaaagagggtgaccgattaattgga
cgtgttattcttaacaagagaacaaccatgcccaaagaatcaggtgcactactaggatta
aaagttgttggaggaaaaatgactgatttaggacgtcttggtgccttcatcaccaaagta
aagaagggtagcctagcagatgtagtaggacatctaagagcaggggatgaagttctagaa
tggaatggtaaacccctgcctggagctacaaatgaagaagtttacaacattattttagaa
tcaaaatcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccaagg
attcccgagagctcccatcctccattagagtctagttcaagttcttttgaatctcaaaag
atggaaagaccttctatttctgttatttctccaactagccctggagcactaaaggatgcc
cctcaggtcttaccaggacaactttctgtgaagctgtggtatgacaaagttggacatcaa
cttattgtaaatgttcttcaggccactgatctaccccctcgagtggatggacggcccagg
aatccctatgtgaaaatgtactttcttcctgatagaagtgataaaagtaaaaggaggacc
aaaacagtaaagaaagtcctagaaccaaaatggaaccaaacttttctctattcgcatgtg
caccgcagagattttagagaacgaatgttagaaataactgtgtgggatcaaccaagagta
caagaagaagaaagtgaatttcttggagagatccttatagagctggagacagccttgcta
gatgatgaaccacattggtataaactgcagacacacgatgaatcttcgctacctctgcct
cagccatcacctttcatgccaaggagacacatccatggagaaagctctagcaaaaaacta
caaagatctcagcgaatcattgatagtgacatctcagattatgaggttgatgatggtatt
ggagtagttcctccagtaggctataggtcaaatactagagaaagcaaatctacaacttta
actgtgccagaacagcaaagaacagctcatcatcgatcacgatctgtatctcctcaccgt
ggtgacgatcagggcaggccccgttcccggttaccaaatgtgccattacagaggagttta
gatgaaattcatcaagtaagaaggtcacgttctccaactagacaccatgatgcctcccga
agtccagttgatcaccgatccagggacatggatagtcagtatttatcagaacaagaaagt
gagcttcttatgctgcccagagcaaaacgaggacgaagtgcagagtgcctacatacgacc
agacattctgttaggcactataaaactttaccatccaagatgcctttaatagagaatggc
actcattggcatatttacagtgaactacagccctcccttgacagggctaggagtgctagt
accaactgcttgagaccagatactagtttgcattcaccagaacgagaaaggcaatctcga
aagtcggaaagatctagcaaccaaaaacagactaggaaaagcaatgcatctgatgcagaa
agggttctcccacaacatctatctagaaggggacaccctaccccaagaacaactgatcag
ccagtcattaggggaaaacatccctctcgctcaaggtcgagtgagcattctagtatcaga
acaatgtgttctatacatcaccttgcgccaggagggtcggcaccagcttctccgcttctg
acaagaatacaccaacaaggaagtccaggacagtctcctcctgcagacacagccttcagt
aatcgtaggggaagacagctcccacaggttccaataagaagcggcagtatagaacaagca
agcttagtagtggaggagcgaacaagacagatgaaaatgaaagtacatcgctataaacag
acaactgggtctggttctagccaagaacttgatcgtgagcaatattccaagtataacata
cataaagatcaatacagaagctgtgataacgtctctgccaaatcatcagatagtgatgtc
agtgatgtgtcagccatttcccgaaccagcagtgcctcacgtctcagcagcacaagcttt
atgtcagagcaatctgagcgccccaggggtagaatcagttcatttacccctaaaatgcaa
ggcagacggatgggaacttcagggagaaccatcacaaagagcacaagtgtgagtggagag
atgtacaaactggagcataatgatggaagccagtcagacacagctgttggcacagttgga
acaggtggaaagaaaaggaggtccagccttagtgccaaagtggtagccatagtatctcgg
aggagtagaagcacatctcaactcagccaaacagaatctggacacaagaaattgaagagc
accatacagagaagcacagaaactggaatggcagccgaaatgaggaagatggtacggcag
ccaagtcgagaatctactgatggcagcattaatagttatagctcggaagggaacctgata
tttcctggagtccgattgggggctgacagtcaattcagtgatttccttgatggactagga
ccagcacagcttgttggacgccaaacactagcaactcctgctatgggtgatatacagatt
ggaatggaagataaaaagggtcagttagaagtagaagtcatcagagcaagaagcctcact
caaaaacctggttccaaatctacaccggctccatatgtcaaagtgtatcttttggaaaat
ggagcctgcatagcaaagaagaaaacaagaattgcccgaaaaaccctggatcctttgtat
caacagtcccttgtttttgatgaaagtccacagggtaaagttcttcaggtgatcgtctgg
ggggactatgggcgaatggatcataaatgtttcatgggtgtggctcaaattcttctggag
gatcttgatctgtccagcatggtaataggatggtataaattgttcccgccatcatcactg
gtggacccaacgctggcacccttgactcgccgggcttcccagtcatctctggaaagttca
actggtcctccttgcattcgatcatag
DBGET
integrated database retrieval system
