Monodelphis domestica (gray short-tailed opossum): 100023612
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Entry
100023612 CDS
T01031
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03030
DNA replication
mdo03410
Base excision repair
mdo03420
Nucleotide excision repair
mdo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100023612 (RFC5)
03410 Base excision repair
100023612 (RFC5)
03420 Nucleotide excision repair
100023612 (RFC5)
03430 Mismatch repair
100023612 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mdo03032
]
100023612 (RFC5)
03036 Chromosome and associated proteins [BR:
mdo03036
]
100023612 (RFC5)
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100023612 (RFC5)
DNA replication proteins [BR:
mdo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100023612 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
100023612 (RFC5)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100023612 (RFC5)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100023612 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
100023612 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_22
AAA_11
AAA_24
AAA_assoc_2
AAA_14
RuvB_N
DEAD
DUF815
ResIII
AAA_5
AAA_19
PhoH
AAA_7
AAA_30
TniB
DNA_pol3_delta
ATPase_2
TIP49
nSTAND3
AAA_25
Thioredoxin_6
bpMoxR
T2SSE
Mg_chelatase
AAA_3
AAA_2
DUF4119
Motif
Other DBs
NCBI-GeneID:
100023612
NCBI-ProteinID:
XP_001375103
Ensembl:
ENSMODG00000015360
LinkDB
All DBs
Position
3:506384057..506396783
Genome browser
AA seq
342 aa
AA seq
DB search
MEAPPIRQQQQQQQPAAKNRNLPWVEKYRPQTLDELISHQDILSTIQKFISEDRLPHLLL
YGPPGTGKTSTILACARQLYKDKEFNSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG
FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT
PELMVPRLEHVIAEEKVDVSEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETAYTC
TGHPLKADIANILDWMLNQDFTSAYRNITELKTLKGLALHDILTEIHLFVHRVDFPPPVR
IHLLIKMADIEHRLAVGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaggccccgccaatccggcagcagcagcagcagcagcagcctgcggccaaaaacagg
aatctgccctgggtggagaagtaccggccacagacgctggatgagctcatatcgcaccag
gacattctcagcaccatccagaagttcatcagtgaagaccggctgccccacctgctcctc
tacggcccccccggaacaggcaagacgtccaccatcctggcctgcgcccggcagctctac
aaggacaaggagtttaactcgatggtcctggagctgaacgcgtcggatgaccgtggaatc
gacatcgtgcgaggccccatcctgagcttcgccagcacgaggacaatctttaagaagggc
ttcaaactcgtgatcctggacgaggcggacgccatgacgcaggatgcgcagaacgccctg
aggagagtgatcgagaagttcacggagaacacgcgcttctgcctcatctgcaactacctg
tccaagatcatccccgccctgcagtcgcgctgcacgcgcttccgcttcggcccgctcacg
cccgagctcatggtgccgcggctggagcacgtcatcgccgaggagaaagtggacgtcagt
gaggacggcatgaaggctctggtgaccctgtccagcggcgacatgcgccgggccctgaac
atcctgcagagcaccaacatggctttcgggaaggtgacggaggagacggcgtacacgtgc
acggggcaccccctcaaggccgacatcgccaacatcctcgactggatgctcaaccaggac
ttcaccagcgcctacaggaacatcacggagctgaagaccctcaagggcctggcgctgcac
gacatcctgaccgagatccacctgttcgtgcaccgagttgactttccacctccagttcga
atacatttgctgatcaaaatggcagacattgaacacaggcttgctgttggcacgagtgag
aagattcagctgagttccctcattgctgccttccaagtcaccagagatttaattgtagca
gaagcctga
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integrated database retrieval system
