Monodelphis domestica (gray short-tailed opossum): 100025284
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Entry
100025284 CDS
T01031
Symbol
PAN3
Name
(RefSeq) PAN3 poly(A) specific ribonuclease subunit
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100025284 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdo03019
]
100025284 (PAN3)
Messenger RNA biogenesis [BR:
mdo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100025284 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
100025284 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
Pkinase
zf-CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
100025284
NCBI-ProteinID:
XP_007495321
Ensembl:
ENSMODG00000009065
UniProt:
F7FR09
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All DBs
Position
4:298753746..298904463
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AA seq
907 aa
AA seq
DB search
MISGSGGLPPPQPSPSSSAAASSTSSAAAAVVVAPPGVGGVPSVVGGAAAAAGVKLKYCR
YYAKDKTCFYGEECQFLHEDPVAGAVPGLGLHSNSVPLALAGGGAATPGPAGYPLGAGPG
GGVGPPPGPKKPDMGGPGGGAGGAGGGAAAGGGGGGLDGPRLTIPGIDGGALTDSTLTDS
YFSTSFIGVNGFGSPGENKFPMMQRMTNSSSSPSLLNDSAKPYASHDPLGSPGSSLFNDF
GALSISQRRKPRKYRLGMLEERLVPVGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTE
NNLQTPNPTASEFIPKGGSTSRLSNLSQSNISAFSQALFSHPSVGSPAAAGLAPGMSLSA
GSSPLHSPKITPHTSPAPRRRSHTPNPANYLVPSSASTPLNNPVSQTSSTGQVIQKETVG
GTTYFYTDTTPAPLTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLI
TMAQIDQADVPAVPAEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYC
LRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSLVFAYDFHAGGETMM
SRHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYVVQLSSALRTIHTAGLACR
VMDPTKILITGKTRLRVNCAGIFDVLTFDNSQNNPLALMAQFQQADLMSLGKVVLALACN
SLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIMPMIGARFYTQLDAA
QMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFH
QVTEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELI
AAANGQL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcggcagcggcggcctcccgcccccccagccgtccccctcttcctccgccgcc
gcctcctccacctcttcggctgccgcggccgtggtggtggctccgccgggggtcggcgga
gttcccagcgtggtcggtggggctgcggcggccgccggcgtgaagctcaagtactgtcgc
tactacgccaaggacaagacgtgtttctacggggaggagtgtcagttcctgcatgaagac
ccagtcgccggggcagttccaggcctcggcctccatagcaacagcgtccccttggccctg
gccggcggcggtgccgctacgccagggcctgcggggtacccgctcggagcgggccccggc
ggcggagtggggccgccgccggggcccaagaagccggacatgggggggcctggaggagga
gcaggcggcgccggaggaggagcagcagcaggcggcggaggcggggggctggacggaccg
cggctgacaattcctggaatagatggaggtgctttaactgatagtactctcacagattcc
tatttcagcaccagctttattggagtcaatggattcggaagtcctggagaaaacaagttt
cctatgatgcagaggatgactaatagcagcagttccccaagccttcttaatgacagtgcc
aagccatatgccagccatgatcctttaggttcacctggttcatccttgtttaatgacttt
ggtgccctcagcatctctcagaggagaaagccaaggaagtaccgactggggatgctggag
gagaggctagttccggtgggatcaaaggcacgaaaagcaaagaatcctattggctgcttg
gctgacaggtgtaaatcaggagtacctatcaatatggtttggtggaacagagtcacagaa
aacaatctacagacaccaaatcctactgcaagtgagtttattcctaaaggaggatcaacc
tccaggctgagtaacctgtcccagtcaaatatatctgccttctctcaagccttgttttct
cacccatctgtgggaagtcctgctgctgctggactagcaccaggaatgtcactgtctgcc
ggatcctcacctcttcattcccctaaaattactccacatacatctcctgcacctagaaga
agaagtcatactccaaacccagcaaattacttggtgccttctagtgcctctacacctctt
aataatcctgtttctcagacttcatctactggccaggttatccagaaggaaactgtaggt
ggaacaacatacttctatactgacacaactccagcacctttgactggaatggtatttcca
aactatcatatttatcctccaactgcacctcatgttgcatatatgcaaccaaaagcaaat
gcaccttccttcttcatggctgatgaactccggcaggagctgatcaacagacatttaata
acaatggctcaaattgatcaagcagatgtcccagcagttcctgcagaagtcgacagctac
catagccttttccctttagaaccactgccaccacccaaccggatacagaaatcaagtaac
tttgggtatatcacatcatgctacaaagctgtaaacagcaaagatgatctgccatattgc
cttcggaggatacatggttttcgacttgttaatacaaaatgtatggtattggttgatatg
tggaaaaaaattcagcattcaaatattgtaacattgcgtgaagtatttaccactaaagca
ttcggagagcattcccttgtgtttgcatatgatttccatgctggcggagaaactatgatg
agcagacactttaatgaccctagtgctgatgcctatttcacaaagagaaagtggggtcag
catgatggaccattaccacggcaacatgctggattattgccagagtctcttatttgggca
tatgttgtccagctcagctctgcactgagaactattcatacagcaggactggcatgtcgt
gttatggatccaacaaagattctgataactggcaaaacaaggttgcgagtaaattgtgcc
ggcatttttgatgttttaacatttgataacagtcagaataatccattggcactaatggct
caattccagcaagcagatctgatgtcattaggaaaagttgtgttggctttggcttgcaac
tctttggcaggaattcagcgggaaaatttgcagaaagcaatggaactggtgacaatcaac
tattcctctgatctgaagaatctgattttgtatttgctgactgaccaaaacaggctacga
agtgtaaatgatatcatgccaatgattggtgctcgattctatactcaattggatgctgct
caaatgagaaatgatgtcatagaggaagatctggcaaaggaggttcagaatggaagacta
tttagacttctagcaaaattgggaaccatcaacgagagaccagagtttcagaaggaccct
acttggtcagaaactggagataggtatctgctgaaactctttagagatcatcttttccat
caggtgacagaagctggtgccccatggattgacctcagtcacattatttcttgtcttaac
aagctagatgctggtgtgccagaaaaaataagcctcatttccagggacgagaagagtgtc
cttgtggtgacatatagcgacttgaagcgctgctttgagaacacttttcaagaactaatt
gcagctgccaacggccagttgtag
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