Monodelphis domestica (gray short-tailed opossum): 100033298
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Entry
100033298 CDS
T01031
Symbol
APLF
Name
(RefSeq) aprataxin and PNKP like factor
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdo03400
]
100033298 (APLF)
DNA repair and recombination proteins [BR:
mdo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100033298 (APLF)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
100033298 (APLF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
Yop-YscD_cpl
FHA
Motif
Other DBs
NCBI-GeneID:
100033298
NCBI-ProteinID:
XP_007476783
Ensembl:
ENSMODG00000003679
UniProt:
F7FAL7
LinkDB
All DBs
Position
1:complement(622360807..622437411)
Genome browser
AA seq
488 aa
AA seq
DB search
MAGGFELEPADGGRRVALLPGETVIGRGPLLGITDKRISRRHAILEVLDNQLRIKPTHIN
PCFHQSSEKSQLLPLETNKWHWLNPGDSFSLLVDKYTFRVFSTHPEIECTLRNSQMLDED
ELFDESPTSPPFSAKYRNSSEQPNSVQRKRILPAWMIEGDLNVQSLEIPFTQEDNGVTKE
RIHMHATSSKGKKRLSSSEKSENIGAEQDPKRRHRADDQEDYTSSSKEANGSSDVISVTK
IEAKSERSEIPRDQIVEDLHDQDCEHRISPRNKINKTDENKKNVSIEYSENPKIHQDKLL
QKKIQGLDPEQSSNPEASSSTTSIAVAQDFGGNHPRRTPCFYGASCYRKNPIHFQQFSHP
SDGDYRDTQVMNQDEVDNRPECPYGTSCYRKNPQHKIEYKHSKPTEMKIRRSRHKANKKG
ASVLDNSDNDGPPNEYDLSDSFLDDDEEEESEPTDEDSDWEPTNEDQEGEEDVEELLKEA
KKFMKRNK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccgggggctttgagctcgagccggcggatggcggccgccgggtggccttgttgcct
ggtgagacggtgattggacgcgggccgctgctgggcataacagacaaaagaatatcaaga
agacatgccattctggaggtcttggataatcaacttagaatcaaaccgacccatataaat
ccttgttttcatcagtcttctgaaaagagccagctattgccattggagacaaataaatgg
cattggttgaatccaggagatagtttttccttattagttgataaatacactttccgagtt
ttctctacacatcccgaaatagaatgcactttaagaaacagtcagatgctggatgaagat
gaactatttgatgaatcacctacatctcctcctttttctgcaaaatacagaaatagtagt
gagcagccaaactctgtccagaggaagcgaatcctcccagcttggatgattgaaggagat
ctaaatgttcaaagccttgaaataccatttacccaagaagataatggagtaacaaaagaa
agaattcacatgcatgcaacatcatcaaaagggaaaaaaagattgtcttcctcagagaaa
tcagaaaatattggagcagaacaagatccaaaaagaaggcacagagctgatgaccaggaa
gattatactagttcatcaaaggaagcaaatggatcatctgatgtcataagtgtaacgaaa
atagaggccaagtctgaaagatctgaaattccaagagatcaaatagttgaagatctccat
gatcaggactgtgaacatagaatatctcctagaaacaaaataaataagacagatgaaaat
aaaaaaaatgtatccatagaatattctgagaatcccaaaattcaccaggacaaattatta
cagaagaagatccaagggcttgacccagaacagagctctaaccctgaagcctctagttca
actacaagcatagctgttgcacaagattttgggggaaatcaccccaggagaacgccttgc
ttttatggagcaagttgctacaggaagaaccctatccattttcaacaatttagtcatccc
agtgatggggattacagagatacacaagttatgaatcaagatgaggttgacaacagacct
gaatgtccatatggaacttcttgttataggaaaaatcctcaacacaagatagaatataag
cacagtaaaccaacagaaatgaaaatcaggagatccagacacaaagctaataagaaaggt
gcaagtgttttggataatagtgataatgatggcccaccaaatgagtatgatttgagtgat
agctttttggatgatgatgaagaagaagagtctgaaccaacagatgaggattctgactgg
gaaccaacaaatgaagaccaagaaggtgaagaagatgttgaagagcttttgaaggaagcg
aaaaagttcatgaagagaaacaaataa
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