KEGG   Mycobacterium dioxanotrophicus: BTO20_24010Help
Entry
BTO20_24010       CDS       T05102                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mdx  Mycobacterium dioxanotrophicus
Pathway
mdx03030  DNA replication
mdx03410  Base excision repair
mdx03420  Nucleotide excision repair
mdx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BTO20_24010
   03410 Base excision repair
    BTO20_24010
   03420 Nucleotide excision repair
    BTO20_24010
   03430 Mismatch repair
    BTO20_24010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdx03032]
    BTO20_24010
   03400 DNA repair and recombination proteins [BR:mdx03400]
    BTO20_24010
Enzymes [BR:mdx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BTO20_24010
    6.5.1.6  DNA ligase (ATP or NAD+)
     BTO20_24010
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BTO20_24010
DNA replication proteins [BR:mdx03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BTO20_24010
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BTO20_24010
DNA repair and recombination proteins [BR:mdx03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BTO20_24010
   NER (nucleotide excision repair)
    Other NER factors
     BTO20_24010
   MMR (mismatch exicision repair)
    Other MMR factors
     BTO20_24010
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase DUF3220
Motif
Other DBs
NCBI-ProteinID: ART71197
UniProt: A0A1Y0C7X3
LinkDB All DBs
Position
4935269..4936792
Genome map
AA seq 507 aa AA seqDB search
MLLAEVVAASADVAASSGRLAKTERIATLLSAIIAAGEPVAVVVAWLSGELPQRQIGVGW
AGLRDLPTPAATPTLTVTDVDSRLSAIGAVTGKGSQAHRARLVRELFGAATAGEQTFLRR
LLGGELRQGALVGVMADAVARSSGIPATEVRRAAMLAGDLPAVAAAAATGGVTAVQAFGL
QVGRPVGPMLAQTASDIDDALEKLGGTAVLETKLDGARVQIHRVGSDVSIYTRSLDDVTS
RLPEVVAATLALPVTDLIADAEAIALRPDGRPHRFQVTASRFGRRNPTDEVPLSVFFFDL
LHVDGRDLLDLPTLERRAALDAIVPASRRVDHIVTADPEQAREFVATTLAAGHEGVMAKA
PGAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPETGGFVMLG
KTFKGMTDAMLAWQTERFTELADGPIDGYVVKLRPEQVVEIAFDGVQGSSRYPGGMALRF
ARVLRYRDDKSPEEADTVETVRALYER
NT seq 1524 nt NT seq  +upstreamnt  +downstreamnt
atgctgcttgccgaggtcgtcgccgcatccgccgacgtggcggcgagctcgggacggctg
gccaaaaccgagcgcatcgccacgctgctgagcgcgatcattgccgccggcgaacccgtc
gcggtcgtggtcgcctggctctccggggagctgccgcaacgtcagatcggcgtgggctgg
gcgggcctacgggacctgccgacacccgcggccacccctacgctgaccgtcaccgatgtg
gacagccggctcagcgcgatcggcgcggtcaccggtaaaggctcgcaggcccaccgggcc
cgcctggtccgcgagctgttcggcgccgccaccgccggtgaacagaccttcctgcgccgc
ctgctcggcggtgagttgcgtcagggagcgctggtcggcgtcatggccgacgccgtcgca
cgctcgtcgggcattccggcgaccgaggtgcgccgcgccgccatgctcgccggcgacctg
cctgccgtcgcggccgcggcagccaccggcggcgtcaccgcggtacaggcctttggcctg
caggtcggccgcccggtggggccgatgctggcgcagaccgcaagcgacatcgacgatgcc
ctcgaaaagctcggcggcacagccgttctggagacaaagctggatggcgcacgggtgcag
attcaccgcgtcgggtccgacgtgtccatctacacccgcagcctcgacgacgtcacctcg
cggctaccggaggtggtcgcggcgacgctggcgctcccggtcaccgacctcatcgccgat
gccgaggccatcgcgctgcgtcccgacggccggccgcatcggttccaggtcaccgcctcg
cgcttcggccgccggaatccgaccgacgaggtgccgctgtcggtgttcttcttcgacctg
ctgcacgtcgacgggcgcgatctcctcgacctgccgaccctcgaacgtcgcgccgccctc
gatgcgatcgtcccggcctcccggcgcgtcgatcacatcgtgaccgccgaccccgaacag
gcccgcgaattcgtggccacgaccctggccgccgggcacgaaggggtgatggcgaaagcc
ccgggagcgccgtacgaggcggggcggcgcggggcgggctggctcaaggtcaagccggtg
cacacgctggatctggtggtgctcgccgtggaatggggctcggggcggcgcaccggaaag
ctctccaatattcatctgggcgcacgcgatccggaaacaggcgggttcgtgatgctgggc
aagacgttcaaagggatgaccgacgcgatgcttgcctggcagaccgaacgcttcaccgag
ctggccgacggtcccatcgacgggtacgtggtgaaactgcggcccgagcaggtcgtcgag
atcgctttcgacggcgtgcagggctcgtcccggtatcccggcggaatggcgttgcggttt
gcccgcgtgctgcgttaccgcgacgacaaatcgcctgaagaggccgacaccgtcgagact
gtccgggccctgtacgaacgctga

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