KEGG   Mycobacterium dioxanotrophicus: BTO20_29155Help
Entry
BTO20_29155       CDS       T05102                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mdx  Mycobacterium dioxanotrophicus
Pathway
mdx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BTO20_29155
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdx03400]
    BTO20_29155
Enzymes [BR:mdx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BTO20_29155
DNA repair and recombination proteins [BR:mdx03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BTO20_29155
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: ART72075
UniProt: A0A1Y0CAT0
LinkDB All DBs
Position
complement(6020794..6023052)
Genome map
AA seq 752 aa AA seqDB search
MERYERVRLTNPDKVLYPATGTTKAEVFDYYLSIAEVMLPHMAGRPVTRKRWPNGVDEPS
FFEKQLASSAPDWLARGTIVHKSGTTTYPVIDTREGLAWIAQQAALEVHVPQWRFDHGEV
GPATRIVFDLDPGEGVTMPQLCEVAQAVRELMGDIGLTTYPLTSGSKGLHLYVPLADPVS
SQGASVLARRVAQQLEHAMPQQVTATMTKSLRAGKVFLDWSQNNAAKTTIAPYSLRGREF
PTVAAPRTWDEIGDPDLRHLRFDEVLHRVSRDGDLLVGLDDDAPVADRLTTYRSMRDAAK
TPEPVPKSVVPTGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPETTSVNHLAV
HTEDHPIEYLDFHGAIPKGEYGAGKMIIWDTGSYEAEKFRVTDDPDAKNGEVIFTLRGSR
LDGRYALIQTEGKNWLAHRMKDQPRVQLQDFAPMLATEGSVAKLKESQWAFEGKWDGYRL
LVDADHGQLQLRSRSGRDVTGEYPQLQALAADLADHHVILDGEVVALDEAGVPSFGEMQN
RARSTRVEFWAFDILLLDGRSLLRAKYTDRRRLLEALAAGGGLIVPPLLPGDGPEAMDHS
REQRFEGVVAKKRDATYQPGRRSASWIKDKFWNTQEVVIGGWRQGEGGRSSGIGALMLGI
PAEGGLHFAGRVGTGFTEKELSKLKKLLAPLHIDESPFNAPLPTLDARGVTFVRPELVGE
VRYSERTSDNRLRQPSWRGLRPDKTPDDVVWE
NT seq 2259 nt NT seq  +upstreamnt  +downstreamnt
atggagcgctacgaacgggttcggctgacgaaccccgacaaggtgctctatcccgccacc
ggcaccaccaaagccgaggtgttcgactactacctcagcatcgccgaggtcatgctgccg
cacatggcaggccggccggtcacccgtaagcgctggcccaacggagtggacgagccgtcg
ttcttcgagaagcaactcgcatcgtcggccccggattggctggcgcgcggcaccatcgtg
cacaagtccgggacgacgacctacccggtgatcgacacccgtgaggggctggcctggatc
gctcagcaggccgcattggaagtgcatgtcccgcaatggcgattcgaccacggtgaggtg
ggtcccgcgacgaggatcgtgttcgacctcgaccccggcgagggggtcaccatgccgcag
ctgtgcgaggtggcccaggcggtgcgtgagctgatgggcgacatcggcctgacgacgtac
ccgttgaccagcggcagcaagggcctgcatctgtatgtgccgctggctgatccggtcagc
tcccagggggcgtcggtgctcgcgcggcgggtggcccagcagctggagcacgccatgccg
caacaggtgacggccaccatgaccaagagcctgcgggcaggcaaggtgttcctggactgg
agtcagaacaacgccgccaagaccaccatcgcgccgtattccctgcgcgggcgggagttt
ccgactgtcgccgcgccccgcacctgggacgagatcggggacccggatttgcgtcatctg
cggttcgacgaagtgctgcaccgggtttcgcgggatggtgacctgctggtcgggctcgac
gacgatgcgccggtggccgacaggctcaccacctaccgcagcatgcgcgacgcggcgaag
acaccggagcccgtacccaaaagcgttgtcccgacgggtaacaacgaccggttcgtgatc
caggagcaccacgcccgccgcctgcactacgacctgcggctggaacgcgacggcgtgctg
gtgagctgggccgtgcccaagaacctgcccgaaaccacctccgtgaatcaccttgcggtg
cacaccgaggaccatcccatcgagtatctggacttccacggcgcaatcccgaaaggggag
tacggcgccgggaagatgatcatctgggacaccggaagctacgaggcggagaagttccgg
gtcaccgacgacccggatgccaagaacggcgaggtcatcttcacattgcgcggcagccgc
ctcgacggccggtacgccctcatccagaccgagggcaagaactggctcgcgcaccggatg
aaggatcagccccgggtgcaactgcaggacttcgcgccgatgctggccaccgaagggtcc
gtcgccaaactcaaggaatcccaatgggcattcgaaggtaagtgggacggctaccggctg
ctggtcgatgccgaccacggtcagctgcagctgcgctcacgcagcggacgcgatgtcacc
ggcgagtatccgcagctgcaggcgttggccgccgatctcgccgaccaccacgtgatactc
gacggcgaggtcgtcgcgctcgacgaggcgggcgtaccgagtttcggtgagatgcagaac
cgggcgcggtccacccgggtcgagttctgggcgttcgacattctgctgctcgacgggcgg
tcgttgttgcgggccaagtacaccgatcgccgtcggctgctggaggcgctggcagccggt
ggtgggctgatcgtgccgccgctgctgcccggtgacggacccgaggccatggaccactcc
cgcgagcagcggttcgaaggcgtcgtcgccaagaagcgggacgccacctatcaacccggc
cggcggtcggcgtcgtggatcaaggacaagttctggaacacccaagaggtggtgatcggc
ggctggcgccaaggcgagggcggtcgcagcagcggtatcggcgcgctgatgctcggaatc
ccggccgagggcgggctgcacttcgccggccgcgtgggtaccggcttcacggagaaggag
ttgagcaagctcaagaaactgcttgccccgctgcacatcgacgaatcaccgttcaacgca
ccacttcccacgctcgacgcgcgaggggtgaccttcgtgcggccagagttggtcggcgag
gtgcgctacagcgaacgcacgtccgacaatcggctgcgccagccgagctggcggggtctg
cgcccggacaagacgcccgacgatgtggtgtgggagtag

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