KEGG   Methylorubrum extorquens AM1: Mex_1p2466
Entry
Mex_1p2466        CDS       T00921                                 
Symbol
rpoN
Name
(GenBank) sigma N (sigma 54) factor of RNA polymerase
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mea  Methylorubrum extorquens AM1
Pathway
mea02020  Two-component system
mea02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mea00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Mex_1p2466 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Mex_1p2466 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mea03021]
    Mex_1p2466 (rpoN)
Transcription machinery [BR:mea03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Mex_1p2466 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Arg_repressor HTH_3
Other DBs
NCBI-ProteinID: ACS40245
UniProt: C5ARD6
LinkDB
Position
2591289..2592836
AA seq 515 aa
MGIEMSLLQRLEMRQGQALVMTPQLLQAIKLLQLSQLDLSAYVDAELERNPLLERAESEG
ESEREAPEASGDGEYDGGDGPESETWLGSEMTQSRSEIEGDLDTRLDNVFADENPTPRET
GTGDMLSLTPAPYGNAGGSFDGELPDFEATLTAETSLREHLAAQLDLATQNPSDRLIGSF
LIDAVDDAGYLREDIDGVAERLGASLDDVARILKLVQTFDPPGVAARDLAECLAIQLREQ
DRFDPAMQALVSRLDLVAKRDFPALRRLCGVDDEDLVEMLAEIRRLDPKPGRAFGAHAVE
VLVPDVFVRPAPDGSWLVELNSEALPRVLVNQSYYARVSKGAVADGDKAFLSECLQTANW
LTRSLEQRARTILKVATEIVRQQDAFFLHGVAHLRPLNLKTVAEAIGMHESTVSRVTSNK
SIGTSRGTLEMKYFFTAAIPGAAGAASHSSESVRHRIKQLVDAEASDVLSDDALVQRLRD
EGIDIARRTVAKYRESLRIPSSIERRREKMATAVR
NT seq 1548 nt   +upstreamnt  +downstreamnt
ttgggcatcgagatgagtctgctccagcggctcgagatgcgccagggccaagccctggtg
atgacaccgcaactgctgcaggcgatcaagctcctgcagctctcgcagctcgatctctcg
gcctatgtcgatgccgaactggagcggaatccgcttctggagcgcgccgagtccgaaggg
gaatccgagcgcgaggcgccggaagcttcgggcgacggcgagtacgatggcggcgacggg
ccggaatctgagacctggctcggctcggagatgacgcagagccgcagcgagatcgagggt
gacctcgacacgcgcctcgacaacgtgttcgccgacgagaaccccaccccgcgcgagacc
gggaccggggacatgctctcgctgaccccggccccttacggtaatgccggcggcagcttc
gacggcgagcttcccgatttcgaggcgacgctgaccgccgaaaccagcttgcgcgagcac
ctcgccgcacagctcgatctggcgacgcaaaacccctcagaccggttgatcggcagcttc
ctgatcgatgcggtcgacgatgcggggtacctgcgcgaggacatcgacggcgtggccgag
cggctcggcgcctccctcgatgacgtcgcccgcattctgaaactcgtccagaccttcgat
ccgccgggcgtggccgcccgcgacctcgccgaatgcctcgcgatccagcttcgcgagcag
gatcggttcgatccggcgatgcaggcgctggtctcgcgcctcgatctcgtggccaagcgc
gactttccggccctgcgccgcctctgcggtgtggacgacgaggatctcgtcgagatgctg
gccgagatccgccgcctcgaccccaagcccggccgcgccttcggcgcccacgcggtcgaa
gtgctggtccccgacgtgttcgtccgccccgcgcccgacggctcctggctggtggaactg
aactccgaggcgctgccgcgggtgctggtcaaccaaagctactatgctcgcgtctcgaag
ggcgcagtggcggacggcgacaaggcgttcctgtccgagtgcctgcagacggcgaactgg
ctcacccgcagcctggagcagcgggcgcgcaccatcctcaaggtcgccaccgagatcgtc
cgtcagcaggacgccttcttcctgcacggtgtcgcccacctgcgtccgctcaacctcaaa
acggtcgccgaggcgatcggcatgcacgaatcgaccgtctcacgcgtcacctccaacaag
tcgatcggcaccagccgcggcaccctggagatgaagtacttcttcaccgccgcaatcccc
ggcgccgccggtgccgcgtcccattcctcggaatcggtgcgccaccgcatcaaacaactt
gtcgatgcggaagcctccgacgtcctgtccgacgacgcgctggtccagcgcctgcgcgac
gagggcatcgacatcgcccgccgcaccgtcgccaagtatcgggagtcgctgcggatcccc
tcgtcgatcgagcgccgccgggagaagatggccacggccgtccgctga

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