Methylorubrum extorquens AM1: Mex_1p2466
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Entry
Mex_1p2466 CDS
T00921
Symbol
rpoN
Name
(GenBank) sigma N (sigma 54) factor of RNA polymerase
KO
K03092
RNA polymerase sigma-54 factor
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea02020
Two-component system
mea02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Mex_1p2466 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mex_1p2466 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mea03021
]
Mex_1p2466 (rpoN)
Transcription machinery [BR:
mea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mex_1p2466 (rpoN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Arg_repressor
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACS40245
UniProt:
C5ARD6
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All DBs
Position
2591289..2592836
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AA seq
515 aa
AA seq
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MGIEMSLLQRLEMRQGQALVMTPQLLQAIKLLQLSQLDLSAYVDAELERNPLLERAESEG
ESEREAPEASGDGEYDGGDGPESETWLGSEMTQSRSEIEGDLDTRLDNVFADENPTPRET
GTGDMLSLTPAPYGNAGGSFDGELPDFEATLTAETSLREHLAAQLDLATQNPSDRLIGSF
LIDAVDDAGYLREDIDGVAERLGASLDDVARILKLVQTFDPPGVAARDLAECLAIQLREQ
DRFDPAMQALVSRLDLVAKRDFPALRRLCGVDDEDLVEMLAEIRRLDPKPGRAFGAHAVE
VLVPDVFVRPAPDGSWLVELNSEALPRVLVNQSYYARVSKGAVADGDKAFLSECLQTANW
LTRSLEQRARTILKVATEIVRQQDAFFLHGVAHLRPLNLKTVAEAIGMHESTVSRVTSNK
SIGTSRGTLEMKYFFTAAIPGAAGAASHSSESVRHRIKQLVDAEASDVLSDDALVQRLRD
EGIDIARRTVAKYRESLRIPSSIERRREKMATAVR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgggcatcgagatgagtctgctccagcggctcgagatgcgccagggccaagccctggtg
atgacaccgcaactgctgcaggcgatcaagctcctgcagctctcgcagctcgatctctcg
gcctatgtcgatgccgaactggagcggaatccgcttctggagcgcgccgagtccgaaggg
gaatccgagcgcgaggcgccggaagcttcgggcgacggcgagtacgatggcggcgacggg
ccggaatctgagacctggctcggctcggagatgacgcagagccgcagcgagatcgagggt
gacctcgacacgcgcctcgacaacgtgttcgccgacgagaaccccaccccgcgcgagacc
gggaccggggacatgctctcgctgaccccggccccttacggtaatgccggcggcagcttc
gacggcgagcttcccgatttcgaggcgacgctgaccgccgaaaccagcttgcgcgagcac
ctcgccgcacagctcgatctggcgacgcaaaacccctcagaccggttgatcggcagcttc
ctgatcgatgcggtcgacgatgcggggtacctgcgcgaggacatcgacggcgtggccgag
cggctcggcgcctccctcgatgacgtcgcccgcattctgaaactcgtccagaccttcgat
ccgccgggcgtggccgcccgcgacctcgccgaatgcctcgcgatccagcttcgcgagcag
gatcggttcgatccggcgatgcaggcgctggtctcgcgcctcgatctcgtggccaagcgc
gactttccggccctgcgccgcctctgcggtgtggacgacgaggatctcgtcgagatgctg
gccgagatccgccgcctcgaccccaagcccggccgcgccttcggcgcccacgcggtcgaa
gtgctggtccccgacgtgttcgtccgccccgcgcccgacggctcctggctggtggaactg
aactccgaggcgctgccgcgggtgctggtcaaccaaagctactatgctcgcgtctcgaag
ggcgcagtggcggacggcgacaaggcgttcctgtccgagtgcctgcagacggcgaactgg
ctcacccgcagcctggagcagcgggcgcgcaccatcctcaaggtcgccaccgagatcgtc
cgtcagcaggacgccttcttcctgcacggtgtcgcccacctgcgtccgctcaacctcaaa
acggtcgccgaggcgatcggcatgcacgaatcgaccgtctcacgcgtcacctccaacaag
tcgatcggcaccagccgcggcaccctggagatgaagtacttcttcaccgccgcaatcccc
ggcgccgccggtgccgcgtcccattcctcggaatcggtgcgccaccgcatcaaacaactt
gtcgatgcggaagcctccgacgtcctgtccgacgacgcgctggtccagcgcctgcgcgac
gagggcatcgacatcgcccgccgcaccgtcgccaagtatcgggagtcgctgcggatcccc
tcgtcgatcgagcgccgccgggagaagatggccacggccgtccgctga
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