Methylorubrum extorquens AM1: Mex_1p3409
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Entry
Mex_1p3409 CDS
T00921
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit)
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mex_1p3409 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mea03021
]
Mex_1p3409 (rpoZ)
03400 DNA repair and recombination proteins [BR:
mea03400
]
Mex_1p3409 (rpoZ)
Enzymes [BR:
mea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mex_1p3409 (rpoZ)
Transcription machinery [BR:
mea03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mex_1p3409 (rpoZ)
DNA repair and recombination proteins [BR:
mea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mex_1p3409 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
T2SSS_2
Motif
Other DBs
NCBI-ProteinID:
ACS41146
UniProt:
C5AY47
LinkDB
All DBs
Position
complement(3546827..3547237)
Genome browser
AA seq
136 aa
AA seq
DB search
MARVTVEDCIEKVENRFELVLLASHRARLLAAGAPLTVERDRDKNPVVALREIGDETITA
EDLKEQLIHSMQKYVEVDEPEAETVPLLSSSPAAAAVAPQSSSDDKNVQFDFMSEEDLLR
GLENLAPPTETDDEGE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtcaccgtcgaagactgcatcgagaaggtcgagaaccgcttcgagctggtc
ctgctcgccagccaccgggcgcgcctgctcgccgccggcgccccgctgaccgtggagcgc
gaccgcgacaagaaccccgtcgtggcccttcgcgagatcggcgacgagaccatcacggcg
gaggatctcaaggagcagctcatccactcgatgcagaaatacgtcgaggtggacgagccc
gaggccgagaccgtgccgctcctgtcgagctcgcctgccgctgccgcggtggcgccgcag
tcctcctcggacgacaagaatgtgcagttcgacttcatgagcgaggaggatctcctccgc
ggtctcgagaacctcgcaccgccgaccgagaccgacgacgagggcgagtaa
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