Megasphaera stantonii: DKB62_08800
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Entry
DKB62_08800 CDS
T05599
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
meg
Megasphaera stantonii
Brite
KEGG Orthology (KO) [BR:
meg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meg03009
]
DKB62_08800 (rimO)
Enzymes [BR:
meg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DKB62_08800 (rimO)
Ribosome biogenesis [BR:
meg03009
]
Prokaryotic type
ribosomal protein modification factors
DKB62_08800 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AXL21659
UniProt:
A0A346B0L6
LinkDB
All DBs
Position
1886405..1887736
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AA seq
443 aa
AA seq
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MEKIGFVSLGCSKNLIDTEVMLGILRDKHMEITDDLADADIIIVNTCTFIEKAKEESVNT
ILQAAEYKKTGKCRLLIVTGCLSQQYKEELLKEMPEIDALLGTGSWNRIWEAVEVANQGE
RACFMDDVSHLYDEHTSRMRTTPSYSAYVKIAEGCNNGCSFCIIPHVRGRLCSRPVASVV
EEVKQLAADGVKEINIIAQDTTSYGVDLAGRSLLPDLLRELVKIDGVRWIRLFYLYPSYF
TDELMNLIVEEEKICPYVDLPLQHISQSVLKRMNRRDSEEDVRNLMKKLCSHGRKLTLRS
TFIVGFPGETEEEFQELCDFVDETEFDDVGVFTYSQEEGTAAARMDGQIPEDVKEERYHA
LMAIQAKVSERRNQELEGTIHTFLVESIQEEGGVRQAVGRIEVQAPEVDGLTYLEDAETV
QPGDMVQVRIVQGFAYDLVAELV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattggattcgtcagcctgggctgctcgaaaaacctcatcgatacggaagta
atgcttggcattcttcgcgataaacatatggaaattaccgacgatttggccgatgccgat
atcattatcgtcaatacgtgtacctttattgaaaaggcgaaggaagaatcggtcaatacg
attttgcaggccgctgaatataagaaaacaggcaaatgccgcctgctgatcgtgacgggc
tgcctcagccagcagtataaggaagaattgctgaaggaaatgcctgaaatcgacgccctg
ctgggtacgggctcttggaaccggatatgggaggccgtcgaagtggcaaatcagggcgaa
cgggcctgcttcatggacgacgtgagccacttgtacgacgagcacacgagccgcatgcgc
acgacgccgtcgtacagcgcctacgtcaagatagccgaaggctgcaacaacggctgctcc
ttctgcatcattccgcacgtgcgggggcgcttgtgcagccgtcctgtcgcgtcggtcgta
gaagaggtaaagcagctggctgccgacggcgtgaaggaaatcaatatcatcgcccaggat
acgacgagctatggcgtcgatttggccggccgctccctcctgcccgatttgctgcgggag
ctggttaaaatagacggcgtccgctggatccgcttgttttatttatatccgtcttatttt
acggacgaattgatgaatctcatcgtcgaagaagaaaagatttgcccctacgtcgacctg
ccgctgcagcacatttcccagtccgtgcttaaacgcatgaaccgccgcgattcggaagaa
gacgtgcgcaatctgatgaagaagctttgtagccacggccgcaagctgaccctgcgttcg
acctttatcgtcggctttcccggcgaaacggaagaagaattccaggaattgtgcgatttt
gtcgacgaaacggaattcgacgacgtcggcgtctttacgtattcccaggaagaaggcact
gcagcggcacggatggacggccagattccggaagacgtcaaggaagaacggtatcacgcg
ctcatggctattcaggccaaggtatcggaacggcgcaatcaggagctggaggggacgatt
catacctttctcgtcgaaagcattcaggaagaaggcggcgtgcgccaggccgtaggccgc
attgaggtgcaggctccggaagtagacggcctgacctatctggaagatgcggaaacggtg
cagcccggcgatatggtgcaggtgcgcatcgttcagggctttgcttacgatttagtagcg
gagctggtatga
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