Methylotenera versatilis: M301_1379
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Entry
M301_1379 CDS
T01247
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
meh
Methylotenera versatilis
Pathway
meh03030
DNA replication
meh03410
Base excision repair
meh03420
Nucleotide excision repair
meh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M301_1379
03410 Base excision repair
M301_1379
03420 Nucleotide excision repair
M301_1379
03430 Mismatch repair
M301_1379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meh03032
]
M301_1379
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_1379
Enzymes [BR:
meh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
M301_1379
DNA replication proteins [BR:
meh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M301_1379
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
M301_1379
NER (nucleotide excision repair)
GGR (global genome repair) factors
M301_1379
MMR (mismatch excision repair)
DNA ligase
M301_1379
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M301_1379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
BRCT_2
HHH
DUF4874
Motif
Other DBs
NCBI-ProteinID:
ADI29762
UniProt:
D7DI77
LinkDB
All DBs
Position
complement(1529981..1532029)
Genome browser
AA seq
682 aa
AA seq
DB search
MLDPMAQPDLFGSLGQPNLALRCQQLRQLIAQYDHEYYVLDAPSVPDSEYDLVYRDLQDI
ERQHPNLITPDSPTQRVSGSAANAFNSITHRQAMLSLNNAFEDSELEAFDKRVREALGQE
QVEYAVEPKFDGLAITLTYENGIFTQGATRGDGYTGEDVTHNLRTVRSIPMRLNCENAPK
LLEVRGEVLMFKRDFEKLNQAQLAKGEKLFANPRNAAAGSLRQLDAKITATRPLSFFAYG
LGVADGAPALGSHSMAMDYLANLYFPVSEVRQLVMGVTGLRDYYQKIGQLRNELPFDIDG
VVYKVNQFNQQNELGFVSRAPRWAIAHKFPAQEALTVVEDINVQVGRTGAITPVARLAPV
FVGGVTVTNATLHNEDEVRRKDVHIGDTVSVRRAGDVIPEVVSVVLERRLADARRFEMPT
ACPECGSHILKQADEAVARCTGGLFCPAQRKQAITHFASRRAMDIEGLGEKLVDQLVEAN
LVHTLADIYQLNLETLSNLDRMATKSAQNILDALDHSKITTLARFIYALGMRNVGEATAK
DLAKHFGNLSALMQADAASLLTVNDVGPVVAESISNFLGEQHNQDVIRALQHAGISWPET
EGKQLATGHLLGKSFVLTGTLPTLSRDAAKEMIEAVGGKVSGSVSKKTDFVVAGSDAGSK
LDKAQELGLVILDEAGLLALLA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcctatggcgcagccagacctatttggaagtttagggcaacccaatctggca
ttacgctgccagcagttgcgtcaacttatagcccaatatgaccatgagtattatgtgctt
gatgcgccatctgtgcccgatagtgaatacgacctcgtctaccgcgacttgcaagacatc
gaacgtcaacaccccaatttaatcaccccagattcgccaacacagcgtgtaagtggttct
gctgccaatgccttcaatagtattacgcacagacaggctatgctgtcactcaataatgcg
tttgaggatagtgagttagaagcctttgataaacgcgtccgcgaagcattggggcaagag
caggttgagtatgctgttgagccaaaatttgacggcttggccattactttaacttatgag
aatggcatttttacgcaaggtgcaacccgtggtgatggttacacgggtgaagatgtcacc
cataatttgcgtactgtgcgttcaatcccaatgcggcttaattgtgagaacgcacctaaa
ttattagaggtgcgtggcgaagtgttaatgtttaagcgcgattttgagaagcttaatcaa
gcgcagttggctaaaggtgaaaagctgtttgccaacccgcgaaatgccgcagctggtagc
cttcgtcaattagatgcaaaaattaccgcaacacgcccactaagcttttttgcttatggt
ttaggagtagcagacggcgccccagccttaggcagccatagcatggcgatggattatcta
gcaaacctgtattttcctgtcagcgaagtgcggcaattggtcatgggcgtaacaggccta
cgcgattattaccaaaaaattggtcagctgcgcaacgaactgccgtttgatattgatggc
gtagtttataaagttaatcaattcaatcaacaaaatgaacttggctttgtttcgcgcgcc
ccacgctgggcgattgcacataagtttccagcgcaagaagcattaacagtcgttgaagat
attaatgtgcaagtaggccgtactggcgctattacaccagtagcaaggctggcgcccgtg
tttgttggcggagtaactgtcaccaatgccacattgcacaacgaggatgaagtgcggcgt
aaagatgtacatattggcgatacagtaagcgtgcgtagggcaggggatgtgatcccagaa
gtcgtcagtgttgtactagagagacgccttgcggatgcacgtcgctttgaaatgccaaca
gcatgccctgaatgtggttcacatattctaaaacaggcagatgaagccgtagcccgttgc
acgggcggtttgttttgtcctgcgcaacgtaaacaagcaattacgcactttgcatcacgg
cgcgcaatggacattgaaggattgggcgaaaagttagttgatcaactagttgaagctaat
ttagtgcatacgctggctgatatctatcaactcaacttagagacattaagcaatctagat
cgcatggcgactaaatctgcgcaaaacattttagatgcgctagatcacagtaaaataacc
acactagcccgctttatctatgcgctgggtatgcgcaacgtgggtgaagctaccgctaaa
gatttagccaagcactttggcaacttatctgcactcatgcaagctgacgccgcatcgcta
ttaactgtgaatgatgttgggccggtagttgccgagtctattagtaatttcttaggtgaa
cagcataatcaagatgtcattcgagcgctgcagcacgctggcatctcatggcctgaaact
gaaggcaagcagcttgctacggggcatttgcttggtaagtccttcgtgctcacgggcaca
ttgccaactttatcgcgcgatgcagcaaaagaaatgatagaggcggtaggcggcaaggtg
agcggtagcgtttccaagaaaacagattttgtcgttgcaggcagtgatgcaggtagtaag
ttagataaagcgcaggaacttggtttggtcatactggatgaagcgggtttgctggctttg
ctggcttaa
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