Methylotenera versatilis: M301_2545
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Entry
M301_2545 CDS
T01247
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
meh
Methylotenera versatilis
Pathway
meh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
meh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M301_2545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meh03400
]
M301_2545
DNA repair and recombination proteins [BR:
meh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M301_2545
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M301_2545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
BCA_ABC_TP_C
RsgA_GTPase
nSTAND1
AAA_21
DnaJ_CXXCXGXG
nSTAND3
AAA_23
APS_kinase
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
ADI30905
UniProt:
D7DNA4
LinkDB
All DBs
Position
2787562..2790375
Genome browser
AA seq
937 aa
AA seq
DB search
MEFIKIRGARTHNLKNISLDIPRNQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLARMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLYARAGDPEC
PEHGIKLEAQTVSQMVDSVLALPEDTKLMILAPVVSNRKGEQLDLFEELKAQGFVRLRVD
GKIYEVDALPQLTKTTKHTVEVVIDRIKVKQDMKQRIAESFETALRLAEGKAIAVEMDTE
KEHLFSAKFSCPVCDYSLAELEPRLFSFNNPMGACPKCDGLGNINFFDPKRVVAFPHLSL
AAGAIKGWDKRNQFYFQMLASIATHYNFNLDTAFEKLPEYIQKVLLNGSGKDVMPFKYLN
ERGVFFEKTHAFEGILNNLQRRYHETDSQTVREELAKYLNSQSCPDCSGTRLRKEARHVK
VGNKNIHEVCEVPLKLALTFFDTLELTGAKLAIADKIVKEISNRLKFLTNVGLEYLSLSR
SAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLETLKRLRDIGNSVI
VVEHDHDAILTADYVVDIGPGAGEHGGRIVAEGTPAEVLANPDSLTGQYLSGKKQIIYNK
KRTPPDPARWLKLSNATGNNLKDVTLKLPVGLLSCITGVSGSGKSTLINDTLYRVVSQHL
YGSSTEPAPYNEIDGLAFFDKVVDVDQSPIGRTPRSNPATYTGLFTPIRDLFAGVPESRV
RGYGPGRYSFNVKGGRCEACQGDGVIRVEMHFLPDVYVPCDVCKGHRYNRETLEIQFKGK
NIREVLEMTVEQAHTFFSAQPVISRKLKTLLDVGLGYITLGQSATTLSGGEAQRVKLALE
LSKRDTGRTLYILDEPTTGLHFADIQLLLDVIHRLRDAGNTIVIIEHNLDVIKTADWIVD
MGPEGGDGGGTIIAEGTPEQVALSTESYTAKYLKAML
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaattcatcaaaatacgtggtgcgcgaacgcacaatcttaaaaacatttcgctggat
attccacgcaatcagttggtcgtgattacgggtttatcgggctctggcaagtcttcactt
gcttttgatacgctgtatgcagaaggtcagcgccgctatgtcgaatcgctgtcggcttat
gcacgccaattcttggcgcgtatggataaacctgatgttgatttgattgaaggtttatcg
cccgccatttctattgagcaaaaatctacatcgcacaatccgcgttcgactgttggtacc
gtgactgaaattcacgattacctgcgcttgctctacgcccgcgcaggtgacccagaatgc
cctgaacatggcatcaagctagaagcccaaactgtgagccaaatggtagatagcgtctta
gcgctgcctgaagataccaagctgatgattttggcgcctgtggtaagtaaccgcaaaggt
gagcaactcgatttatttgaagagctcaaagcgcaaggttttgtgcgcttacgcgtagat
ggcaaaatctatgaggtcgatgctttaccgcaactgacaaaaaccacaaaacatacggtt
gaagtcgttatagaccgcatcaaagttaaacaagacatgaagcagcgtattgctgagtca
tttgaaaccgcattacgtttagcggaaggcaaagccattgcagttgaaatggataccgag
aaagagcatttattctcagctaagttttcatgccccgtgtgtgactactcacttgctgaa
ttagagccgcgcttattctctttcaacaacccgatgggcgcctgcccaaagtgtgatggc
ttaggcaatatcaactttttcgaccctaaacgcgtggttgcatttccgcatttatcactc
gctgcgggtgcgattaaaggctgggataagcgtaatcagttttacttccaaatgttggca
agtattgctacgcattacaatttcaaccttgataccgcatttgagaagttgcccgaatat
attcaaaaagtattgctcaacggcagcggcaaagatgtgatgccatttaaataccttaat
gaacgtggtgttttctttgaaaaaacgcatgcatttgaaggtattttaaataatttgcag
cgccgttatcacgagaccgactcgcaaaccgtgcgcgaagaactcgcaaaatatttaaat
tcacaaagctgccctgattgctctggcacacgcttacgcaaagaagcgcgccatgtaaaa
gtaggtaataagaacattcacgaagtatgtgaagtgccacttaagttagcgcttactttc
tttgatacgcttgaattgactggcgctaaacttgcgattgccgataagattgtgaaagaa
attagcaaccgtttgaagtttctaacgaacgttggtttggagtatttatcactttcacgt
tcagctgaaacattgtctggtggcgaggcgcaacgaattcgcttggcctcacaaatcggc
agcggcttaacgggcgtgatgtacgtgttagatgagccttcaatcggcttgcatcaacgc
gacaatgacagattgttagaaacactgaagcgcctgcgcgatattggcaacagcgtgatt
gtggtcgagcatgaccatgatgcgattctgacagctgattacgtggtggatattggtcca
ggtgcaggtgagcatggtggcagaattgttgcagagggcacgcctgctgaggtgctggca
aacccagactccctgacagggcagtatttaagcggcaaaaaacaaattatttataacaaa
aagcgtacgccgccagacccagcgcgctggttgaaattaagtaacgcgactggcaataat
ctaaaagatgtcacattgaaactacctgtgggcttgctaagctgcattacaggcgtttcc
ggtagcggaaaatccaccttgattaacgacactttataccgtgtagtttcgcagcattta
tatggcagcagcacagaaccagcgccgtataatgaaatcgatggcttggcattttttgat
aaagtggtcgatgtagaccaaagcccaattggccgtacgccacgttcaaacccggcaact
tacactggtctatttacgccaattcgcgatttatttgctggcgtgccagaaagccgcgtg
cgtggttatggccctggccgatactcattcaacgttaaaggtgggcgctgcgaagcttgc
caaggtgacggtgtaatacgtgtagaaatgcacttcttacctgacgtttacgtgccatgt
gatgtgtgtaaaggccaccgctacaaccgcgaaactttagaaatccaattcaaaggcaaa
aacattcgtgaagtattagaaatgaccgtggagcaagcgcacactttctttagcgcacaa
cctgttatttcacgcaaacttaaaactttgttagatgtaggtttaggttacatcacgctc
ggacaaagcgcgacaacattaagtggcggtgaagctcagcgcgttaaacttgcgctagaa
ctcagtaaacgcgacactggccgcactttatacattctggatgaacccaccactggttta
cattttgccgatattcaactattgctagatgtgattcatcgcctaagagatgcgggcaac
accatagtgattattgagcataatctagacgtgattaaaactgcggattggattgtcgat
atgggacctgaaggtggcgatggcggcggcactattattgcagaaggtacgccagaacaa
gtggccttgagcacagaaagctatacggctaaatatctcaaggcgatgttgtaa
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