Methanosarcina sp. Kolksee: MSKOL_2220
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Entry
MSKOL_2220 CDS
T03821
Name
(GenBank) Coenzyme B synthesis from 2-oxoglutarate: steps 4, 7, 8, 11, and 12 (small subunit)
KO
K16793
methanogen homoaconitase small subunit [EC:
4.2.1.114
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00300
Lysine biosynthesis
mek00680
Methane metabolism
mek01100
Metabolic pathways
mek01110
Biosynthesis of secondary metabolites
mek01120
Microbial metabolism in diverse environments
mek01210
2-Oxocarboxylic acid metabolism
mek01230
Biosynthesis of amino acids
mek01240
Biosynthesis of cofactors
Module
mek_M00608
2-Oxocarboxylic acid chain extension, 2-oxoglutarate => 2-oxoadipate => 2-oxopimelate => 2-oxosuberate
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
MSKOL_2220
09105 Amino acid metabolism
00300 Lysine biosynthesis
MSKOL_2220
Enzymes [BR:
mek01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.114 methanogen homoaconitase
MSKOL_2220
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Gene cluster
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Motif
Pfam:
Aconitase_C
Aconitase_2_N
Motif
Other DBs
NCBI-ProteinID:
AKB47997
UniProt:
A0A0E3QEY4
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All DBs
Position
complement(2869669..2870169)
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AA seq
166 aa
AA seq
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MSLIIGRVWKFGDNVNTDEIIPGKYLRSKDVQIFAAHAMEGIDQEFTKKFRIGDIVVAGT
NFGCGSSREQAPLALKYAGVSCVIAKSFARIFFRNAINIGLPLIEVDIECQEGDKVKVDL
AKGEVTVSDRDIFKGNKLPDFLLEILNDGGLVAHRKKQSASKNINL
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcttattataggccgggtctggaaattcggagacaacgttaatactgatgaaata
atcccgggcaagtatttgcggagcaaagatgtacagatctttgcagctcatgcaatggaa
ggaattgatcaggaatttacaaaaaagttcaggattggagatatcgttgttgcaggcact
aacttcggctgtgggtcttcaagagagcaggctcctcttgctttgaaatatgcaggagta
tcatgtgttatagcaaagtcttttgccagaatctttttcagaaatgcgatcaatatcggg
ctacctctcatagaggttgatattgagtgccaggaaggagataaagttaaagttgatctg
gccaaaggtgaagttacggtttcagatagagacatatttaaagggaacaaattgccggat
ttcctgcttgagatacttaatgatggtggacttgtagcccatcgaaaaaagcaaagcgcg
agcaaaaatataaacttataa
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