Candidatus Megaira endosymbiont of Mesostigma viride: LF888_05785
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Entry
LF888_05785 CDS
T07589
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
menm
Candidatus Megaira endosymbiont of Mesostigma viride
Brite
KEGG Orthology (KO) [BR:
menm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
menm03400
]
LF888_05785
Enzymes [BR:
menm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LF888_05785
DNA repair and recombination proteins [BR:
menm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LF888_05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
PDDEXK_9
AAA_11
AAA_30
RsbU_N
Motif
Other DBs
NCBI-ProteinID:
UCM93977
LinkDB
All DBs
Position
complement(1286272..1289451)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSILQLKASDPTLSTWVSASAGTGKTKILTDRVLRLLLQNVPFNKILCLTFTNAAANEMQ
ERIIAQFQKWSHSSQEDLLDSLQNTLGRKPTKDELIKASSLFELYLKTQDQINIYTIHSF
CQKILKKFPLEAGISPHFKIIDEFKVNKIIRDIKRQIFNLPEIQHVINFLIENFHELTID
DIFNEIISVKTKILTKKLTSLSAESNPELSGLECINNLAKHDPNISIEVISNSDIKNLIL
DSLGADLASIDIKPFFLTLSGEKKKRIVTKKIASPGSDLYEELEKIQDQIYQLDQVKKTE
NLLLNSKLFEILAEKLILEFESYKTKNAFLDYDDLILHTQSLLTNSTAKEWVLYKLDGGI
EHLLVDEAQDTSNSQWRIIEALAQEFYSGESGNNKSRTIFVVGDEKQSIFSFQGADISAF
SYMNKFLNDKLKEGKKAFETIDLNVSYRSTKEILTCVKDVFNKIAKNSPEDFKANLPEMI
PYRNAHNGLVQLWPLCSNEGGDAADEFWPICPENTQNNSKVILAKKIANYVKEQISSGRI
LPSTNNKISPQDFMILFRSRDDFTDEVIKALKEAKIDITGLDRISLADDLAVADLIAIAK
FVLNPENDLNLATLIKSPILDLSEHELYKLVIAARANKLSLWEYIKLSEQYSLIKDKLEE
FLALYRSFPLNNFFPYITDVMDYRNIMNKNDEAIDEFLKLSNDYFLEYGNSLQNFIYWFV
KTPITVKRDTESLNKLRIMTVHGSKGLQAPIVILCDTTKLPTMSDRFIWDENDQLLSAKS
SSYIPEFYEGIKAKEQHKAYQEYLRLLYVGMTRAEDHLIICGYQGNSKIPENCWYELIKK
SLQEIGSLDTHGIVTYGDNSLVSSSQKPSLCLAENKKADQGIINPPTPWKLNKTVRLSYT
NIETDTSYKNTDLLEYGLVFHKILEEAMRNRNLSSIFNHPLITTLESSLQKRIKTSLEKI
AINEEFNELSKYDLKTELSFGYKTDSEIKIGRVDLLVIQKERIIIIDYKSGKSSKGLIPD
TYIKQLRFYKQAFREIYPDKIIDCKIIWLDSGTIVNVAA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagtattctacaactgaaagcttcagatcctaccttatcaacctgggtatcagcatca
gctggtactggtaaaacaaaaatcttaacggatcgtgtactccgccttctcttgcaaaac
gtgccatttaacaaaatcctgtgcttaactttcactaatgctgccgctaatgagatgcag
gaaaggataattgcccagtttcaaaaatggtcacactcttcacaagaggacttactggat
agtttgcaaaacacactgggtagaaaaccgactaaagatgagttaattaaggcatcatca
ctctttgaattatatctaaaaactcaagatcaaataaatatttacactattcactctttt
tgccagaaaattttaaagaaattcccgctagaagcaggaatttctcctcatttcaaaatt
attgacgaattcaaggttaataagataataagagatataaaaaggcaaatattcaacctc
cctgaaattcagcatgttattaattttcttatagagaactttcatgaattaaccatcgat
gatatttttaatgaaataatttctgtaaaaacaaagatattaacaaaaaagctcacctct
ttatctgccgaaagcaatcccgagcttagcggattagaatgcattaacaatttagcaaaa
catgatccaaatatttcgatagaagttatatctaattctgatatcaagaatttaatccta
gattcacttggagctgatcttgcaagcatagatattaagcctttctttttaacattatcc
ggagaaaagaaaaaaagaatcgtaactaaaaaaatagcttctcctggctctgacctatac
gaagaactggaaaaaattcaagaccaaatctaccaactcgatcaagttaaaaaaacagaa
aatttacttttaaactcaaaattatttgagatattagcagaaaaattgattctagaattc
gagtcatacaaaaccaaaaacgcttttcttgattatgatgatctaatacttcatactcaa
agtttactgacaaattccacggcaaaggaatgggtactatataaattagacggcggtata
gaacatttactagtggacgaggctcaagatacaagtaatagccaatggcgtataatagaa
gctttagcccaagaattttattctggagaatccggtaataacaaaagcagaacgatcttt
gtagtaggagacgaaaaacaatcgatttttagtttccaaggggctgatatttctgccttt
tcctatatgaataaatttctaaacgataaactaaaagaagggaaaaaagctttcgaaaca
attgatcttaatgtctcgtaccgttccactaaagaaattcttacctgtgtaaaagatgta
tttaacaaaatagcaaaaaacagccctgaagactttaaagctaatttaccagaaatgata
ccttatcgtaatgcacataatgggctagttcagttatggcctttatgcagtaatgaaggc
ggtgatgcagctgatgaattttggcccatctgcccagaaaacacacaaaataatagcaag
gttattttggcaaaaaaaattgctaattatgttaaggaacaaataagcagcggcaggatt
ttaccttctacaaataacaagatatcgcctcaagatttcatgattcttttccggagcagg
gatgattttacggatgaggtcatcaaagctttgaaagaggctaaaatcgacataacagga
cttgatagaatatctctagctgacgatctagcggtcgcagacctgattgctattgctaaa
tttgtactaaatcctgaaaatgatttaaatttagctacattaattaagtctccgatttta
gacttatcggagcacgagctttataaactggttattgctgctcgggcaaataaattatcc
ttatgggaatatataaaattatcggagcaatattctttaataaaagataaactagaagag
tttttagccctatatcgctcttttcctttaaacaatttctttccatatatcactgatgta
atggattataggaacatcatgaataaaaatgacgaagcaatcgatgaattccttaaactt
agtaatgactattttcttgaatatggaaattctttacaaaactttatttattggtttgta
aaaaccccaataactgtaaaaagagatacagaatcattaaataagctccgtatcatgact
gttcacggctcaaaaggtctgcaagctccgattgtgatattatgtgatactaccaaactt
ccaaccatgagcgatagattcatctgggatgaaaatgatcagttactatcggcaaaatcc
tcctcttatattccagaattttatgaaggaattaaagcaaaagaacaacataaagcttat
caagaatatttaaggttgttatatgtcggaatgacccgagcagaggatcatttaatcatt
tgtggttatcaaggtaacagcaaaattcccgaaaattgctggtatgaattaataaaaaaa
tccctacaggaaattggctctttagacacacacggtatcgtaacttatggtgataacagt
ttagtttccagtagccaaaaaccatcactttgcttggcagaaaataaaaaggctgaccag
gggataataaacccaccaacaccgtggaaactaaataaaaccgtacgtttatcttataca
aatattgaaactgatacttcttataaaaatacagatttactcgagtatggcctagtgttc
cataaaatccttgaagaagccatgagaaatagaaatctatctagtattttcaatcatcca
ttaattactacattagaaagctctttacaaaaaagaataaaaaccagcctagaaaaaata
gcaattaatgaggaattcaacgaattatcgaaatatgacttaaaaacggaattatctttt
ggctataaaacagattcagaaataaaaattggcagagtagaccttttagtaattcagaaa
gagcgaattatcattatcgattataaatccggtaaatctagtaaaggattaataccggat
acctacatcaagcaattaaggttttataaacaagcttttagagaaatatatccggataaa
attatagattgcaagattatttggcttgatagcggaactatagtaaatgtagctgcataa
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