Methylovorus sp. MP688: MPQ_1399 Help Entry MPQ_1399          CDS       T01361                                  Symbol lig Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism mep  Methylovorus sp. MP688 Pathway mep03030   DNA replication mep03410   Base excision repair mep03420   Nucleotide excision repair mep03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mep00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     MPQ_1399 (lig)    03410 Base excision repair     MPQ_1399 (lig)    03420 Nucleotide excision repair     MPQ_1399 (lig)    03430 Mismatch repair     MPQ_1399 (lig)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mep03032]     MPQ_1399 (lig)    03400 DNA repair and recombination proteins [BR:mep03400]     MPQ_1399 (lig) Enzymes [BR:mep01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      MPQ_1399 (lig) DNA replication proteins [BR:mep03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      MPQ_1399 (lig) DNA repair and recombination proteins [BR:mep03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      MPQ_1399 (lig)    NER (nucleotide excision repair)     GGR (global genome repair) factors      MPQ_1399 (lig)    MMR (mismatch excision repair)     DNA ligase      MPQ_1399 (lig)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       MPQ_1399 (lig) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT BRCT_2 TrwB_AAD_bind RNA_pol_A_CTD Motif Other DBs NCBI-ProteinID:  ADQ84558 LinkDB All DBs Position 1441258..1443327 Genome browser AA seq 689 aa AA seqDB search MFDNAPATVTSATPEVQIRQLREQINLYNYQYYVLDDPSVPDSEYDKLFRELQALEHAHP ELLTPDSPTQRVGASPLKAFASVQHRQAMLSLNNAFEESELTAFDKRIRDALGIAQVEYA VEPKFDGLAITLTYENGLFVQGATRGDGYTGEDVSSNLRTIRAIPMRLPVENPPALIEVR GEVLMLKRDFDKLNRQQAERGEKLFANPRNAAAGSLRQLDPAITATRPLMFFAYGLGIAE GVPQLSTHAAAMDYLASLRLPVSDQRDTVQGLAGLLDYYARIGAARPNLPFDIDGVVYKV NSIAQQNELGFVSRAPRWAVAHKFPAQEALTEIQAIDVQVGRTGAITPVARLKPVFVGGV TVTNATLHNQDEIDRKDVRVGDTVSVRRAGDVIPEVVAVVLEKRPADTVAYRLLEAINHQ CPVCGSHVIRQEDEAVARCTGGLFCSAQRKQAVLHFASRRAIDIEGLGEKLVDQLVDGAH IHTLADIYRLDLATLSSLDRMAEKSAQNILDALQASKATTLARFIYALGIRNVGEATAKD LARYFGSLQALLAADIEQLQQVPDVGPIVAESIRQFLSEPHNQQVIQDLQDVGLHWTESD GAGTQQGVLTGKTLVLTGTLPTMSRDQAKALIEAAGGKVAGSVSKKTDFVVAGEEAGSKL TKAQELGVAVIDENGLLALLEDKQASHDD NT seq 2070 nt NT seq  +upstreamnt  +downstreamnt ttgtttgacaatgcaccagccaccgtgacctctgccacgccagaggtccagatccgccag ctgcgcgagcagatcaatctctacaattatcagtactatgtgctggatgaccccagcgtt ccggacagcgaatacgacaagctgtttcgcgagttgcaggcgttggagcacgctcaccca gagctgctcacgcccgattcccccacgcaacgcgtaggcgcgtcgccgctcaaggcgttt gccagcgtgcagcaccggcaggccatgctctcgctcaacaatgcgtttgaagaaagcgaa ctgactgcctttgacaagcgcatccgtgatgccttgggcattgcgcaggtggaatatgca gtagagcccaagtttgacggcctggccatcacgctgacctatgaaaacggcctgttcgtg caaggcgccactcgcggcgatggctacacaggcgaagatgtcagctccaacctgcgcacc atacgcgctattcccatgcgcctgccggtagaaaacccaccggcactgatcgaagtacgc ggcgaagtgctgatgctgaaacgggatttcgacaagctgaaccgccagcaggccgagcgc ggtgaaaagctgtttgccaacccgcgcaatgccgccgctggcagcctgcgtcagcttgac cctgccattaccgcgacgcgccccttgatgttttttgcctatggcctgggcatcgccgag ggcgtgccgcagctcagcacgcatgctgccgccatggattatctggcatcactacgcctg ccggtgagtgatcagcgcgatacggtgcaagggctggcaggattgctggactattacgcc cgcataggcgccgcccggcccaatctgccgtttgatattgatggcgtggtttacaaggtc aacagcattgcccagcaaaacgaactgggctttgtgtcgcgcgccccgcgctgggcagtg gcgcataaattcccggcacaagaggcgctcaccgaaatacaggcgattgatgtgcaagtg ggtcgcactggcgccattacacccgtcgcacggttgaaaccggtatttgtcggcggcgtg accgtcaccaatgccaccttgcataatcaggatgaaatcgatcgcaaggatgtgcgcgtg ggcgataccgtcagcgtgcgcagggcaggggatgtgattccggaagtggtcgccgtggtg ctggaaaaacgcccggccgataccgttgcctatcgcctgctggaagccatcaaccaccaa tgcccggtgtgcggctcgcacgtcatccggcaagaagatgaagccgtggcgcgctgcact ggcggtctcttttgctcggcccagcgcaagcaggctgtgctgcattttgcctcgcgccgc gccattgatatcgaaggcctgggcgaaaagctggtcgatcaactggtagatggggcgcat atccataccctggcagatatctaccgcctggatctcgctacgctgtcgtccctggaccgc atggcggaaaagtccgcccagaacattctcgatgccctgcaagccagcaaagccactacg ctggcgcgatttatttatgcccttggcatacgcaatgtaggcgaggccacggccaaggat ctggcgcgctactttggcagcctgcaagccttgctggcggcagacattgaacagttgcaa caagtgccggatgtcggccccatcgtcgccgaatccatacgccagttcctctccgagcca cataaccagcaagtcatccaggacctgcaggacgtcgggctgcactggacggaatccgac ggcgcaggcacgcagcaaggcgtgctcaccggcaaaaccctggtgctcactggcacgcta cccactatgtcgcgcgatcaggccaaggcactgattgaagccgcaggtggcaaagtcgca ggcagtgtttccaagaaaaccgattttgtcgtcgccggtgaagaagctggcagcaagctc acgaaggcgcaggagctgggcgttgccgtgattgatgaaaacggcctgctggcactgctg gaggacaagcaggccagccatgacgactga

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