Methylovorus sp. MP688: MPQ_2475
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Entry
MPQ_2475 CDS
T01361
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mep
Methylovorus sp. MP688
Pathway
mep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPQ_2475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mep03400
]
MPQ_2475
Enzymes [BR:
mep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MPQ_2475
DNA repair and recombination proteins [BR:
mep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MPQ_2475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ADQ85617
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All DBs
Position
complement(2534913..2535695)
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AA seq
260 aa
AA seq
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MSLYRIISANLNGIRSAANKGFYPWLQQQNADIVCMQELKAQLADMTPEMLNPEGYFGYF
HYAEKKGYSGVGIYTRVQPDAVIVGLGIADIDAEGRYLELQFGNLSVVSLYLPSGSSGEE
RQAFKFSVMTRFLVHLEALRAAGRDVVICGDWNIAHKEADLKNWKGNKKNSGFLPEERAW
LTDLFDRVGWVDVYRVLHPDTTDECYTWWSNRGQAWAKNVGWRIDYQIATPDFAAKAIAA
SIYKLERFSDHAPLIIDYQR
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttgagcttgtaccgaattatatctgcaaatctgaatggcatccggtccgcggccaataaa
gggttctacccatggctgcaacagcagaatgctgacatcgtctgcatgcaggagctgaag
gcgcagctggcggacatgacgccggaaatgctgaaccccgaagggtactttggctatttt
cattacgccgaaaagaaaggctacagtggcgtgggtatctatacccgcgtacagccggat
gcggtgattgtgggcctggggatagcggatattgatgccgaagggcgctatctggagttg
cagtttggcaatctcagcgtggtgtcgctgtatctgccctccggttccagcggcgaagag
cgccaggccttcaagttcagtgtgatgacgcgattcctggtgcatctcgaagccttgcgt
gctgccggtcgcgatgtggtgatctgtggcgactggaatatcgcgcacaaagaggccgat
ctcaaaaactggaaaggcaacaaaaagaactcaggctttttgccagaggaacgcgcctgg
ctgaccgatctgtttgatcgcgtgggctgggtggatgtttaccgggtgctgcatcccgat
accaccgacgaatgctatacctggtggagcaaccgcgggcaggcctgggccaagaatgtg
ggttggcgtattgattaccagattgcgacgccggattttgctgccaaggcgatagcagcc
agcatctacaagctggagcgctttagcgaccacgcgccgctgatcattgattaccagcgc
taa
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