Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1: MMINT_17620
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Entry
MMINT_17620 CDS
T02692
Name
(GenBank) AAA family ATPase, CDC48 subfamily protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mer
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Brite
KEGG Orthology (KO) [BR:
mer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mer03019
]
MMINT_17620
03009 Ribosome biogenesis [BR:
mer03009
]
MMINT_17620
04131 Membrane trafficking [BR:
mer04131
]
MMINT_17620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mer04147
]
MMINT_17620
Messenger RNA biogenesis [BR:
mer03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MMINT_17620
Ribosome biogenesis [BR:
mer03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MMINT_17620
Membrane trafficking [BR:
mer04131
]
SNARE
SNARE associated proteins
Others
MMINT_17620
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MMINT_17620
Exosome [BR:
mer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MMINT_17620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
TIP49
AAA_5
AAA_14
AAA_22
nSTAND3
AAA_33
AAA_28
AAA_18
RNA_helicase
AAA_7
IstB_IS21
Mg_chelatase
Parvo_NS1
AAA_24
DUF815
AAA_3
Sigma54_activat
AAA_17
SLFN-g3_helicase
ATPase
AAA_19
Cytidylate_kin2
ATPase_2
DUF5906
TsaE
bpMoxR
Sigma54_activ_2
Zeta_toxin
NB-ARC
PhoH
AAA_11
NTPase_1
Vps4_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGN27051
UniProt:
R9TBH0
LinkDB
All DBs
Position
complement(1738802..1741009)
Genome browser
AA seq
735 aa
AA seq
DB search
MGLTKMPESITLRVESAQHQSEVGLGRARIDSFSRSKLGVDMGDFIEITGKRKTAAKVFR
ASPDDEGKGTISIDGMVRSNAGISIGDKVTVSKANVQPAAKIIVAPKIPAGKRVKFGQGV
EELFKKGLLSRPLVKGDSIVIPNIALMGGFLPFIILSTQPGGVVIVDNNTDIVIKTESVD
VEDSNGMSITYDDIGGLEGELKRVREIIELPLKHPELFDRLGIDPPKGVLLYGPPGTGKT
LIAKAVANESGANFYTINGPEIMSKFYGESEEKLREKFEEAEKNAPSIVFIDEIDSIAPK
REAVSGETEHRIVAQMLTLMDGLGERGQVIVIGATNRETALDPALRRPGRFDREIEIGIP
TLKGRREILQIHTRGMPLSDDVDIGHLSAITHGFVGADIASLAREAAMKCLGRYLPEFDL
DRPVPSSILADMRVTSDDFKEALRDVEPSAMREVSVEIPEVSWDDIGGLEKVKETLKELI
ELPLQNPDCYKNVGITPARGVLLYGPPGTGKTLIAKAVANECKVNFLSIKGPEIMSKWMG
DSEKAVRQIFKKAKQIAPSIIFLDEIDAIAPKRGHLNDSGTTERVVNQLLTSMDGFEDME
KVMVVGATNRPDIIDPALLRPGRFDSLTLVPLPDIKDREAIIRVNTKNMQLDNVDFKLLA
AKTEWFSGADITALCRESGLNAIRNGRSVVVQSDFEKALKNVYPSCDKSIIKWYEDFSKK
IERISPEWKDAGAYR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtggggctcacaaaaatgcctgaaagcattacgttacgtgttgagagtgcacagcatcag
tccgaagtaggtttgggcagagcaagaatagacagtttttccaggagtaaactcggtgta
gatatgggtgattttatagaaatcaccgggaagagaaaaactgcagccaaggtattccgt
gcatctcctgatgatgaaggaaaaggaacgatctcaatagacggcatggtaagatccaat
gctggcatatctatcggtgataaagttacagtctccaaagcaaacgtgcagccggcagca
aaaattatcgtagccccgaaaatacctgctggaaaaagagttaagtttggtcagggggtc
gaagaactttttaaaaaaggtcttctcagcaggcctctggtaaagggagattccatagtc
attcccaacattgcactcatggggggatttcttccatttattatattaagtacacagcca
ggcggagtggtaattgtagacaacaatactgatattgtcatcaaaacagaatctgttgat
gtcgaggacagcaacgggatgtccataacctatgatgacatcggcggactggaaggagag
ctgaaacgtgtcagggagattattgaacttccactgaaacatcctgaactctttgacagg
cttggaattgatccgcctaagggagtattgctgtacggccctcccggaaccggcaaaaca
ttgatcgcaaaggctgtagccaatgaatcaggagctaacttttacacgataaacggcccg
gagatcatgtctaaattctacggagaaagtgaagaaaaactccgtgaaaaatttgaagag
gctgaaaagaacgctccgtcaatcgttttcatcgatgaaattgattcgatcgcacctaaa
cgagaagctgtatctggagagactgaacatagaatcgtagcacagatgctgacattaatg
gacggccttggagaaaggggtcaggtaatagtcatcggggccaccaaccgggagactgct
ctcgatccagcactcagacgtccaggcagatttgacagagagattgaaatcggcataccc
acattgaaaggcagaagagagatcctgcagattcatacaagaggtatgcccctgtctgat
gatgtggatataggccacctgtctgctataactcatgggtttgtaggtgcggatatagcc
tcacttgcgagagaagcggcaatgaaatgcttaggccggtatcttccagaatttgactta
gaccgccccgttccatcatcaatcctcgcggatatgagagttacaagtgatgattttaaa
gaagctctcagggatgttgagccgtcagcaatgagagaagtttcagtcgaaatacctgaa
gtaagttgggatgatatcggcggactggaaaaagtcaaggagacgcttaaggaactgatc
gaactcccgcttcagaacccagactgttacaagaatgttggaattactccggcaagagga
gttttactttacggccctcccggaaccggcaaaacattgatcgcaaaggctgtagctaat
gaatgcaaagttaacttcctttcaatcaaaggccctgaaattatgtctaaatggatgggt
gactctgagaaggcggttcgtcagattttcaaaaaagcaaagcagatcgctccatcgatc
atattcttagatgagatcgatgccatagctccgaagaggggccacctcaatgactccgga
acaactgaaagagttgttaaccagctgctgacatcaatggatggctttgaagacatggaa
aaggttatggtggttggtgctacaaacagaccagacattatcgatccagctcttttacgc
cccgggcggtttgattctttaacactggtacctcttccggatatcaaagaccgggaagct
ataatccgcgtaaataccaaaaatatgcagttggataatgtagactttaagctcctcgct
gcaaaaacagaatggttttcaggtgccgatatcaccgcattatgccgtgaaagcggactc
aatgcaataagaaacggaagatctgtcgtagttcagtctgattttgaaaaagccttgaaa
aatgtttatccatcctgtgataaaagcataataaaatggtacgaggacttctcaaaaaag
atagaaagaatatctcctgaatggaaagatgccggagcatataggtaa
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