Chelativorans sp. BNC1: Meso_1037
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Entry
Meso_1037 CDS
T00374
Name
(GenBank) beta-lactamase-like protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mes
Chelativorans sp. BNC1
Pathway
mes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Meso_1037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mes03019
]
Meso_1037
Messenger RNA biogenesis [BR:
mes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Meso_1037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RNase_J_C
Lactamase_B
RMMBL
Motif
Other DBs
NCBI-ProteinID:
ABG62434
UniProt:
Q11JJ1
LinkDB
All DBs
Position
1139261..1140928
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AA seq
555 aa
AA seq
DB search
MASDEAELVFCPLGGVGEIGMNLALYGYGPRDNRTWIMIDCGVSFPGENLPGVDLILPDV
SFIEDQLENLAGIIITHAHEDHYGALLDLWPRLKTNVWMTPFTAGLLEAKRQGEVNAPKV
PVTIYKAGETFTVGPFAIEAIAVAHSIPEPVSLAITTPAGTVIHTGDWKIDPAPELGPKT
DEARFRALGEKGVLALICDSTNAMREGVSPSEQDVGRGLREVIEKAPGRVAVTTFSSNVG
RIRSIAEAARDAGRQVLVLGRSLQRVIDVADELGYLDGLPPFLVEEDFGYIPRENAVILC
TGSQGEARAALAKLARDEMRNVALSPGDTVIFSSRTIPGNEKAILTIKNQLIEQGIRVVE
DSDALVHVSGHPRRNELKQMYEWVRPRILVPVHGEAAHLVAQGSLGAMSGIPEVAQVRNG
GMLRLAPGPAEIIDQVPFGRIYRDGKVIGTDDEVGVRDRRKLSFAGHVAVNVVLDDRYDL
AGDPDLVAIGLPQADSAGEPMEDIMLDAAVGAVRSIPRGNRRDLDLVGEAVRRAVRAAAS
DAWGKKPIVTVFVTQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtccgacgaagcggaactggttttttgccctttgggtggtgtcggcgagatcggc
atgaatttggccctctatggttacgggccgcgcgacaatcgcacctggatcatgatcgat
tgcggtgtgagctttccaggcgagaacctgccgggcgtcgatctcattcttccggatgtc
agcttcatcgaggaccagcttgaaaatctcgcgggcataatcatcacccacgcgcatgag
gaccattacggcgcgttgctggacctttggccgcgcctcaagaccaatgtgtggatgacg
ccgttcacggcaggccttctcgaggccaaacggcagggtgaggtgaacgcgccgaaagtg
ccggtgacgatctacaaggccggcgagaccttcaccgtcggccccttcgccatcgaggcg
atcgccgtcgcccactcgatccccgagcctgtctctctcgccatcaccacgccggcggga
acggtgatccataccggcgactggaagatcgatcccgcgcccgaactcggccccaaaacg
gacgaggcacgcttccgcgccctgggagagaagggcgttctggcgctcatctgcgattcc
accaatgccatgcgcgagggtgtttccccctcggagcaggatgtcggccgggggctgagg
gaggtgatcgagaaggcgccgggtcgcgtggccgttaccaccttctcctccaatgtcggg
cgcatccgctcgatagccgaagcggcgcgcgatgcaggccggcaggtgctggtgctcggg
cgctcgttgcaacgcgtcatcgatgtcgccgacgagctgggatatctggacggattgcca
cccttcctcgtcgaggaggatttcggttatatcccgcgcgagaacgcggtgatcctctgt
accggcagccagggcgaagcccgcgcggcattggcaaagcttgcgcgcgacgagatgcgc
aatgtggcgctctcgccgggtgatacggtcatcttttcctcgcgcaccattccgggcaac
gaaaaggcgatcctcaccatcaaaaaccagctgatcgaacaggggatcagggttgtcgag
gatagcgacgcgctcgttcatgtttccggccatccgcgccgcaacgaattgaagcagatg
tatgaatgggtaaggccgcgcatcctggtgcccgtccatggcgaggccgcccatctggtt
gcgcagggatcgctcggcgccatgtccggaatccccgaggtggcccaggtgaggaatggc
ggcatgctgcgcctggctccaggtccggccgaaatcatcgaccaggttccgtttggccgc
atctaccgggacggcaaggtgattggcacggacgatgaagtgggcgtgcgcgacaggcgc
aagctttcctttgccggccatgtggctgtcaatgtcgtgctcgatgaccgctatgatctg
gcgggcgatccagatctggtggcaatcggcctgccgcaggcggactctgcgggtgagccg
atggaggatatcatgctggatgccgcggtgggagccgtgcgcagcatcccgcgcggcaac
cgcagggaccttgatctcgtgggcgaggcggtgcggcgcgcggtgcgtgcggccgccagt
gacgcctggggcaagaagccgatcgtgacggtctttgtcacccagtaa
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