Manihot esculenta (cassava): 110603572
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Entry
110603572 CDS
T05761
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00500
Starch and sucrose metabolism
mesc01100
Metabolic pathways
mesc01110
Biosynthesis of secondary metabolites
Module
mesc_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
110603572
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mesc01003
]
110603572
Enzymes [BR:
mesc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
110603572
Glycosyltransferases [BR:
mesc01003
]
Polysaccharide
Storage polysaccharide
110603572
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_4
CCDC28
Motif
Other DBs
NCBI-GeneID:
110603572
NCBI-ProteinID:
XP_021597024
LinkDB
All DBs
Position
16:complement(695764..707304)
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AA seq
1146 aa
AA seq
DB search
MEVGLQVHRPLSCRALFHRRTVFKFNRLSGSFPHFNSSHLSSLTSCYSKYPTLGVSCDVI
AGADFSKRRQRKISTANSKGPPPKRFTSKTPARTSTTKRDSKKNGSKEDEVSPTSSEIVD
PHKKTLELKADVDAEQAIEVSKDEKVNQEKKTEEASSVSKTLSVTKINQYVENRSAGSVE
VKTMPVDEITIEERQVDDLKSDSTLKEGSAGTVEKTNEDEVSSLKLRLEVEENLRKQEIE
ELAEDNFSRGNKLFVYPHLVKPDQDIEVYLNRSLSTLNNEPNVLIMGAFNDWRWKSFTIS
LTKTHLKGDWWSCQVHVPKEAYKMDFVFFNGKNAYDNNDKKDFCIPVAGGMDAFAFDDFL
LEERRREQEKLAREQAERERQAEEQRRREEEKAASEADRAQAKVETEKRREILHQLMKNA
PRSVDNVWYIEPNEFRGEDLVQLYYNKSSGPLAHANDLWIHGGYNNWNNGLVVVEKLLKS
ERKDGDWWYANVVVPDRALLLDWVFADGPPQSAMVYDNNHRQDFHAIVPMSIPEELFWVE
EEHQMYRKLQEERQLREQAMHAKAERTARVKAERKEKTLKRFLLSQKHIVYTDPVSVQAG
TAVTVFYNPANTVLHGKSEVWIRCSFNRWTHRKGPLPPQKMFPTGHGSHVKATVKVPLDA
YMMDFVFSEREDGGIFDNRGGMDYHIPVFGGIVKEPPIHIVHIAVEMAPIAKVGGLGDVV
TSLSRAVQDLNHSVDIILPKYDCLNLSHVKDFHYQKSYSWGGTEIKVWFGKVEDLSVYFL
EPLNGMFWTGCIYGCKNDGQRFGFFCHAALEFLQQNGFHPDIIHCHDWSSAPVAWLFKDH
YTHYGLSKARVVFTIHNLEFGAGNIGRAMAYTDKSTTVSPTYSKEVAGNPSVAPHLHKFH
GILNGIDPDIWDPYNDKFIPVSYTSENVVEGKRAAKEALQQRVGLKKADLPLVGVITRLT
HQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRVQNDFLNLANKLRSSHNHHARLCLTYDE
PLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQA
QSLEPNGFSFDGADAAGIDYALNRAISSWYEGREWFYSLCKTVMEQDWSWNKPALDYLEL
YHAARK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgggtttgcaggtacacagacctctcagttgcagagctctctttcaccgaaga
accgtcttcaagttcaatcgtctctctgggtctttccctcattttaatagtagccatctt
tcaagtcttacttcatgctacagcaagtaccctacactcggggtttcatgtgacgttatt
gctggtgcagacttttctaagaggagacagagaaaaatttcaactgcaaactctaaagga
cctcctcctaaaagattcacatcgaaaacgccagcgagaacaagcactacaaagagggat
tcaaagaaaaatggaagtaaggaggatgaagtttctccaacatctagtgagattgtggat
ccccacaagaaaacacttgaacttaaagctgatgtagatgcagaacaggcaattgaagtt
agtaaggatgagaaagttaaccaagaaaagaaaacagaagaagcatcatcagttagcaaa
acactgtcagttaccaaaatcaatcaatatgtggaaaatagaagtgctggtagtgtggag
gttaagactatgccagttgatgaaattactatagaggaaaggcaggttgacgacttaaag
agtgatagtactttaaaagagggaagtgcagggactgttgaaaaaacaaatgaagatgaa
gtttcttctctaaaattgaggttggaagtggaagaaaacttgaggaaacaagaaattgag
gagcttgctgaggataatttctctaggggtaacaaattgtttgtttaccctcatttggtg
aaacctgatcaagatatagaagtatacctcaataggagcctatccactctgaataatgag
ccaaatgttttaattatgggagccttcaatgactggagatggaaatcttttaccataagt
ttgaccaagactcatttgaaaggagattggtggtcttgccaggttcatgttcccaaagaa
gcatacaagatggattttgtgttctttaatgggaaaaatgcttatgacaataacgacaaa
aaggatttctgcatacctgtagcaggtggaatggatgcatttgcatttgatgatttcttg
cttgaggaaagacgtagggaacaagagaaacttgcaagggagcaagctgagagggaaagg
caagcagaagagcagaggcgaagagaagaagagaaggctgcaagtgaagctgatagagcc
caagccaaggtggaaactgaaaagaggcgagaaatattgcaccagttgatgaaaaatgct
ccaagatctgttgataatgtttggtatattgagcctaatgagtttagaggtgaagacttg
gtccagctatattataacaaaagctcaggtccccttgcacatgctaatgacctttggatt
catgggggttataataattggaataatggattggtcgttgtggaaaaacttctcaaatct
gagagaaaggacggcgactggtggtatgctaatgttgtagtgccggatcgagcccttctc
ttggattgggtctttgctgatggtccacctcagagtgcaatggtatatgataacaatcat
cgccaagatttccatgcaattgtcccaatgtccattcctgaagaattgttttgggttgag
gaagaacaccagatgtataggaaactacaggaggagaggcagttaagagagcaggccatg
catgccaaggcagaaagaacagcacgtgtgaaagctgaaagaaaggagaaaactttgaaa
aggttcctattgtctcagaagcacatagtctatactgaccctgttagtgttcaggctgga
actgctgtgacagttttctataatcctgctaacacagttctgcatggtaaatctgaagtt
tggattagatgttcatttaaccgatggacccaccgcaaaggtcctttgccacctcagaag
atgtttcccacaggtcatggttctcatgtcaaagccactgtcaaggttccattagatgca
tacatgatggattttgtattctcggagagggaagatggtggaatttttgacaacagaggt
ggcatggattaccacatacctgtatttggaggaattgtgaaggagccaccaattcacatt
gtgcatattgctgttgaaatggccccaatcgcgaaggttggaggacttggagatgttgtg
actagtctctcccgtgctgtacaagatttaaatcacagtgtggacatcattcttccaaag
tatgactgtttgaaccttagccatgtaaaggactttcattatcagaaaagctattcctgg
ggcggaacagaaataaaagtgtggtttggaaaggtggaagacctttctgtctacttctta
gagcctctgaatgggatgttttggactggttgcatatatgggtgcaagaatgatgggcag
aggtttggattcttttgccatgcagctcttgagtttttacaacagaatggattccatcct
gatattatccattgtcatgattggtctagtgctccagttgcatggttgtttaaggaccat
tatacgcactatggtcttagcaaagctcgagtagtcttcacgattcataaccttgaattt
ggggcaggcaacattgggagagctatggcatatactgacaagtctacaactgtatcccca
acatattcaaaggaggttgctggaaatccttcagttgctcctcatctccacaaattccat
ggaatactgaatggaattgacccagacatatgggatccttataatgataagttcattcct
gtttcctacacatctgagaacgtcgttgaaggcaaaagagcagccaaggaagctttgcag
caaagggttggtttaaagaaagctgatctgcctttagtaggggttatcactcgcctaact
catcagaaaggaattcatctcatcaagcatgcaatttggcgaaccttagatcgcggtggt
caggttgtgttgcttggttcagcgccagatcctcgcgtccagaatgattttttgaatttg
gccaacaaattgcgttcttctcacaatcaccatgctcgcctttgtttgacatatgatgag
ccactatcacacctgatatatgcaggtgctgatttcattctagtcccatcaatttttgag
ccatgcggactgacccaacttacagctatgagatatggttccattccagttgttcgaaaa
actggaggactttatgacactgtgtttgatgttgaccatgataaggagagagcacaagca
caaagtcttgaaccaaatggatttagttttgatggagctgatgctgctggaattgattat
gctctaaatagggcaatttcttcttggtacgagggtcgggaatggttttactcattatgt
aaaaccgtaatggagcaagactggtcttggaataagcctgctcttgactatctggagctt
taccatgccgcacgcaaatga
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integrated database retrieval system
