Manihot esculenta (cassava): 110606484
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Entry
110606484 CDS
T05761
Name
(RefSeq) CSC1-like protein RXW8
KO
K21989
calcium permeable stress-gated cation channel
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesc02000
]
110606484
Transporters [BR:
mesc02000
]
Other transporters
Pores ion channels [TC:
1
]
110606484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
CNP_C_terminal
Motif
Other DBs
NCBI-GeneID:
110606484
NCBI-ProteinID:
XP_021600993
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All DBs
Position
18:4375336..4383739
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AA seq
735 aa
AA seq
DB search
MDIAALLTSAGINIGLCVVLFSLYSILRKQPSNRVVYFGRRLATVRIRSDDFFSIERFVP
SPSWILKAWETTEEEILSIGGLDALAFQRTLVFSIRIFSIAAIICLLLVLPMNYYGKEMQ
HKQIPAESLDVFTIGNVKEGSRWLWAHCLALYVISCGACVLLYFEYKSITEMRLAHIIKS
PLNPSHFTVLVRSIPWSPEESYSDSVKKFFANYYASSYLSHQIVYHRGIIQKLMADAEKM
CKMIMPVPIDGKSLRPCCLSADNTTSFKILSSELGSVKDSISYNDLDIATRENECPVAFV
FFKTRYSAVVATQVLQSSNPMLWVTELAPEPHDVLWSNLSIPYRQLWLRKIATLLAAIVF
MFLFLIPVTFVQGLTQLDKLSRTFPFLRGLLKKDFMNHVVTGYLPSVILMLFLYTVPPMM
MLFSSVEGHVSRSGRKRSAGLKVLYFTIWNVFFVNVLSGSIISQLNVFSSVRDIPTQLAK
AIPTQASFFMTYVLTSGWASLACELMQLFPLSINMFKKFILRNKEDCSDDLMTFPYHTEV
PRVLLFGLIGFTCAIMAPLILPFLLVYFFMAYLVYRNQILNVYIPKYEGGGHFWPIVHKT
TIFSLVLTQIIAIGVFGIKRSPIASGFTFPLVICTLLFNEYCRQRFAPVFKRDAVQVLID
MDRRDEQSGRMKEIHQQLNSAYCQIPMTSHELCASAHGGVNKIEDPEGAGAGTELNELTE
TCAVVNFGGETSTEN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggacattgctgcccttttaacttcagctgggattaatattggtctgtgcgtggtgctt
ttttccttgtattcaatattaagaaagcaaccgagcaacagggttgtgtattttggccgg
aggcttgctacagtacgtataaggagtgatgatttcttctccattgagagatttgtgccc
tctccaagttggattttaaaggcttgggaaacaactgaagaagaaatattgtccattggc
ggtcttgatgcattagcttttcaaaggacgctcgttttcagtatccgtattttttccatt
gctgcaatcatttgcctccttctagtgcttccgatgaattattatggcaaagagatgcaa
cacaagcagatcccagcggagtcattggatgtatttacaatagggaatgtcaaagaaggt
tctagatggctttgggcccattgtctagctctgtacgtcatatcttgcggggcctgtgtt
ctcctttactttgagtataaaagcatcactgaaatgagactagcacatataatcaaatcc
cctctgaatccaagtcatttcactgtccttgtccgctcaataccatggtctccagaagaa
tcatatagtgattcagtgaagaaattctttgcaaattattacgcatcaagctacttgtca
caccaaatagtgtatcatcgtggaattattcaaaaattaatggcagatgctgagaaaatg
tgcaaaatgattatgccggttcctattgatggaaaaagtttaaggccgtgttgtctttct
gcagataatacgacttcttttaagatcctctccagtgaactaggaagtgtcaaggatagc
atcagctacaatgatttggatatagcgacaagagaaaatgagtgtcccgttgcttttgtt
tttttcaagactcgctatagtgctgtggttgccacacaagtgcttcaatcatcaaatccc
atgttgtgggtcacagaattggccccagaaccacatgatgttttatggtcaaacctctct
ataccgtatagacagctttggctgcggaagatagcaacattattggctgctatagtcttc
atgtttttgtttcttattcctgtgacatttgtgcaaggcttgactcaactagataagctg
tcaagaacattcccatttttgagagggcttctaaaaaaggactttatgaaccatgtggta
acaggttacttaccaagtgtcatattaatgttgtttctgtataccgttccaccgatgatg
atgttattctcatcagtggaggggcatgtttctcgaagtggaaggaaaaggagtgcaggc
ttgaaagttttgtacttcacaatttggaatgtttttttcgttaacgttctctcaggctcc
atcattagtcaattgaatgtcttctctagtgtaagagacatacctacgcaacttgccaag
gcaatacctactcaggctagcttcttcatgacttacgttttaacgtcaggttgggcaagt
ctggcttgtgaactaatgcaactgttccctcttagcatcaacatgttcaaaaaattcatt
ctcagaaacaaagaagattgttctgatgatctcatgaccttcccatatcatacagaagtt
cctagggtcctactgtttggtcttattggcttcacttgtgcaatcatggcacccttaata
ttgccctttttgctggtttacttttttatggcctatcttgtataccgcaaccagattctc
aatgtatacataccaaaatacgagggtggaggtcacttttggcctattgtgcacaagaca
acaattttttcattagtgttgacacaaattatagcgatcggggtctttggaattaaaaga
tcacctattgcatcaggtttcacctttccattagtaatttgcaccctgctattcaatgaa
tattgcaggcagcgatttgcccctgttttcaagagggacgctgtacaggttcttatagac
atggataggcgcgacgaacagtctgggagaatgaaggaaatccatcaacaattaaattca
gcgtattgccagatcccaatgacttctcatgaattatgtgcatctgcacatggtggtgtt
aataagatcgaagatccagagggcgctggtgcaggaacggaacttaacgaattaactgaa
acatgtgctgttgtcaattttggaggagaaacatcaactgaaaattga
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