Manihot esculenta (cassava): 110613136
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Entry
110613136 CDS
T05761
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110613136
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesc01007
]
110613136
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesc03016
]
110613136
Enzymes [BR:
mesc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
110613136
Amino acid related enzymes [BR:
mesc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
110613136
Transfer RNA biogenesis [BR:
mesc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
110613136
Prokaryotic type
Other AARSs
110613136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
110613136
NCBI-ProteinID:
XP_021609792
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Position
4:7024253..7047483
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AA seq
1181 aa
AA seq
DB search
MEEVCEGKEFSFPGHEEKILSFWSEIKAFETQLSRTESLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMRGHHVTRRFGWDCHGLPVENEIDRKLGIKRRDEVLKMGIDKYNEE
CRSIVTRYVEEWEKVITRTGRWIDFRNDYKTMDLKFMESVWWVFSQLYEKGLVYKGFKVM
PYSTGCKTVLSNFEAGQNYKDVPDPEIMVSFPIIDDPHNASFVAWTTTPWTLPSNLALCV
NGNFDYVKVRNKYTGKVFVVAESRLSVLPVEKPKSSVANGPAGDSKTSNSKTKGGKSENL
MDSYDLLEKVKGNELLKKRYEPLFNYFSEFSDTAFRVVADNYVTDDSGTGIVHCAPAFGE
DDYRVCIENQIINKGENLIVAVDDDGCFTERITDFSGRYVKDADKDIIENVKARGRLVKS
GSYTHSYPFCWRSDTPLIYRAVPSWFVRVEDLKAKLLENNKQTYWVPDYVKEKRFHNWLE
NARDWAVSRSRFWGTPLPVWTSEDGEEIVVVDSVAKLEKLAGVKVFDLHRHNIDHITIPS
NRGSEFGVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGQFIAEGLDQTRGWF
YTLMVLSTALFGKPAFRNLVCNGLVLAEDGKKMSKKLKNYPSPMEVINDYGADALRLYLI
NSPVVRAETLRFKKDGVYGVVKDVFLPWYNAYRFLVQNAKRLEVEGLAPFSPVDFGKLKN
SSNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTG
EEDCRTALSTLYSVLLTSCKVMSPFTPFFTEVLYQNMRKVSTGAEESIHYCSFPQEEGER
DERIERSVSRMTTVIDLARNIRERHNKPLKSPLREMIVVHPDADFLDDIAGKLKEYVLEE
LNVRSLVPCIDTLKYSSLRAEPEFSVLGKRLGKSMGIVAKEIKAMSQKDILAFEEAGEVT
IASHTLKLADIKVVREFKRPDGLTEKEIDAAGDGDVLVIMDLRPDESLYEAGVAREVVNR
IQKLRKKIALEPTDVVDVYIESLDEDKTKLERVLKSQEQYVRDAIGSPLLSSNLMPPQAV
VIGEESYHQIYELSFTIYLARAALVFKSDAILALYAGNTKFAQGLETYLLSRDHSNLRSE
FQLRNGKITVDCIENQPAADVLLGEHLFLTVGDYFLRTRSG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtctgcgaagggaaggaattttctttccccggccatgaggaaaagatcctt
tctttctggtctgaaatcaaagcctttgagacccaattgtcccgcactgaatccctccca
gagtacatcttttacgatggtcctccttttgctaccggtcttcctcactacggtcacatt
ctcgccggcactatcaaggacattgtcacccgctaccagaccatgaggggccaccatgtt
actcgtcgcttcggctgggattgccacggtttgcctgtggagaatgagatcgatcggaaa
ttggggatcaagaggagagatgaggtgttgaaaatggggattgataagtataatgaggag
tgtaggagtattgtgacgaggtatgttgaagagtgggagaaggtgatcacgaggacgggg
aggtggattgattttaggaatgattataagactatggatttgaagtttatggagagtgtt
tggtgggttttttctcagctttatgagaagggtctggtctataagggtttcaaggtcatg
ccatacagtactggttgcaaaactgtgctgtctaactttgaagctggtcagaattacaag
gatgtccctgaccctgagataatggtgtcatttccaattatcgatgatccccataatgca
tcctttgtggcttggacaacaaccccgtggacacttcctagcaatcttgctctttgtgtt
aatggaaattttgactatgtgaaggtccgtaacaagtatactggaaaagtcttcgtggtt
gctgaatctaggctgtcagttcttcctgtcgagaaaccaaaatcaagtgtggcaaatgga
cctgctggtgattcgaagacatcaaattctaaaactaagggtggaaaatctgaaaacttg
atggattcatatgatttgttagagaaagtcaagggtaatgaactgttgaagaaaaggtat
gaaccattgtttaattacttctcagagttctctgacacggcttttagagttgttgcggac
aattatgtgactgatgatagtggtacgggaattgttcattgtgctcctgcatttggtgaa
gacgattatcgtgtttgcattgaaaatcaaataatcaataagggagaaaatttgattgta
gcagttgatgatgatggctgctttacagagagaatcactgatttcagtggtcgctatgtt
aaggatgcagacaaggatatcattgaaaatgtaaaggcaagaggcaggcttgttaagtct
ggtagctacactcactcctatcccttttgttggaggtcagatactcctcttatttataga
gctgttccaagctggtttgttagagtggaagatttaaaagccaaattgctagaaaacaac
aaacagacatattgggttcctgattatgtaaaggaaaaacggttccacaactggcttgaa
aatgcaagagactgggctgttagtagaagtcgattttgggggactcctcttcctgtatgg
accagtgaggatggtgaagaaatagttgtcgtggattctgttgctaagcttgaaaagctt
gctggtgttaaggtttttgatcttcatcggcacaatattgatcacataactattccatct
aatcgtggttctgaatttggtgtgcttcgacgtgtagatgatgtatttgattgttggttt
gagagtggttcaatgccttatgcttatattcattacccatttgagaatgttgagcttttt
gagaaaaattttcccgggcaatttattgctgaagggctagatcaaactcgtggatggttc
tatactcttatggtgttgtctactgcattgtttgggaagcctgcattcaggaatcttgtt
tgcaatggacttgtcctggcagaggatggaaaaaagatgagtaaaaaattgaaaaactat
ccatcaccaatggaggtcatcaatgattatggagctgatgctttacgattataccttata
aactctccagttgtacgtgctgaaaccttgcgattcaaaaaggatggagtttatggtgtt
gtcaaagatgtcttccttccatggtataatgcatataggttcttagtacagaatgctaag
aggcttgaggttgaagggcttgcaccattctctcctgttgattttggaaaacttaaaaat
tcatctaatgtgttagatcagtggatcaattcagccactcagagtcttgttcattttgtc
cgccaagaaatggatgcataccgactttacacggtggttccatatctcttgaagtttctt
gacaacctcacaaacatatatgtgcgattcaaccgcaagagattaaaaggtcgtacaggg
gaagaagattgccgaactgctctctcaactctttacagtgtgcttttgacatcatgtaag
gtgatgtcgccattcacaccattctttacagaagtgctatatcaaaacatgcggaaagtt
tctactggagcagaggaaagcattcactactgcagttttcctcaagaagagggagagagg
gatgaaagaattgaacgaagtgtttcaaggatgacgactgtaattgatcttgcacgtaat
atccgtgagcggcacaacaaacctctgaaatcaccactgagggagatgatagttgttcat
cctgatgcagacttccttgatgacatagctggaaaattaaaggagtatgtgctggaggaa
ctaaatgtgagatctctagtcccatgtattgatactctgaagtactcttctctgcgtgca
gagccagagtttagtgtgcttggtaaacgacttggaaaatcaatgggtattgttgccaaa
gaaattaaagcaatgtctcagaaagatatcttagcatttgaggaagctggagaagttact
attgcttcacacactctaaagctggctgatatcaaggttgttcgagaattcaaacgtcct
gatggtttgactgagaaggagatagatgctgctggagatggtgacgttttggtgattatg
gatttgcgtccagatgaatcattgtatgaggctggtgttgctcgtgaggttgttaataga
attcagaagttacggaaaaaaattgcccttgaacccacagatgtggtggatgtttatatt
gaatctttggatgaagataagacaaagttagaacgggttctgaaatcacaggaacaatat
gttcgggatgcaattggatctccattactatcctccaacctgatgccaccacaagcggtt
gtaattggggaagagagttaccatcagatatatgaattgtctttcaccatttacttggct
agggctgctttagtattcaaatcagatgcaattctagcgttatatgcgggaaatacaaaa
tttgcacaaggtctggaaacttacctgttatctagggatcattctaatttgagatcagaa
tttcagcttagaaatggcaagataactgttgattgcattgaaaatcagcctgctgcagat
gtgttacttggagaacatttatttttgactgttggggactactttttaagaacaagaagt
gggtaa
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