Manihot esculenta (cassava): 110616291
Help
Entry
110616291 CDS
T05761
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
110616291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110616291
03029 Mitochondrial biogenesis [BR:
mesc03029
]
110616291
Membrane trafficking [BR:
mesc04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
110616291
Mitochondrial biogenesis [BR:
mesc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110616291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
110616291
NCBI-ProteinID:
XP_021614367
LinkDB
All DBs
Position
1:31881172..31887936
Genome browser
AA seq
362 aa
AA seq
DB search
MEGQRYVWEGAIPMQIHLHESEVTTLPPPPPALILAPRIGYLPLLIHLIKPHFAATLPPG
VDTVWFDYNGLPLKWYIPTGVLFDLLSAEPERPWNLTVHFRGYPNNLLIPCEGEDSVKWS
FINSLKEADYIINGNCKNVMHMSQSDQVELWHSVMNGNLEAYLRASSKLKFGIIEDENTL
KMDLHSQKSRKTDGEADMGGQMKTGKIPVRLYVRTVSEDFEDLEDMPKIDSWDKISYINR
PIEIHREGKCFTLHDALKTLMPEFLADKSLTDEEPLRAEGGDEQLVLSEEVSSNRMDAEG
REISCSSVESPYASGGAEILLVRIQGIEPKLEIPFSWVVNNLKNPEHFLHICVCLKFPQV
NS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcaaaggtacgtgtgggagggtgcaattcctatgcagattcatctccatgaa
tccgaagtaactactctgcctcctcctcctccagctcttatcttagctccacggattggg
tacttacctctgcttattcatcttataaagcctcacttcgctgctactcttcctcctggg
gtcgacaccgtctggtttgactataatggcttgcctctcaagtggtatataccaacagga
gttctctttgatcttcttagtgctgaacctgaaaggccttggaatttgacggtacacttc
aggggatatccaaataatttattgattccttgtgaaggtgaagactctgtaaaatggagc
tttattaattcattgaaagaggcagattacataattaatggaaattgcaagaatgtcatg
cacatgtctcaatccgatcaagtggaactttggcactctgtgatgaacggcaatttggaa
gcatacttacgtgcgtcgtctaagcttaaatttggaataattgaggatgagaatacattg
aaaatggatttgcactcacaaaagtctcgaaagactgatggtgaggctgatatgggcggg
caaatgaagacaggtaaaattccagttcgattgtatgtccggactgttagtgaggatttt
gaagatttagaagatatgcctaaaattgatagttgggacaaaatttcttatataaatcga
cctattgagatacatagagaaggtaaatgtttcaccctacatgatgcactgaaaactctt
atgccagaatttttggcggacaaatccttaactgacgaggaaccattgagagcagaaggt
ggagatgaacaattagtattgtcagaagaggtgagcagcaatagaatggatgctgaggga
agagaaatttcatgttcatccgtggagtctccctacgcgtctggcggtgctgaaatttta
cttgtccgcattcagggcattgaaccaaaacttgagatacccttctcttgggtagtgaat
aatttgaaaaatcctgagcactttcttcatatttgtgtctgtctcaaatttccacaagta
aattcttag
DBGET
integrated database retrieval system
