KEGG   Manihot esculenta (cassava): 110617698
Entry
110617698         CDS       T05761                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
mesc  Manihot esculenta (cassava)
Pathway
mesc03022  Basal transcription factors
mesc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mesc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110617698
  09124 Replication and repair
   03420 Nucleotide excision repair
    110617698
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:mesc01001]
    110617698
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesc03021]
    110617698
   03019 Messenger RNA biogenesis [BR:mesc03019]
    110617698
   03400 DNA repair and recombination proteins [BR:mesc03400]
    110617698
Enzymes [BR:mesc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     110617698
    2.7.11.23  [RNA-polymerase]-subunit kinase
     110617698
Protein kinases [BR:mesc01001]
 Serine/threonine kinases: CMGC group
  CDK family
   110617698
Transcription machinery [BR:mesc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110617698
Messenger RNA biogenesis [BR:mesc03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     110617698
DNA repair and recombination proteins [BR:mesc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110617698
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 110617698
NCBI-ProteinID: XP_021616348
LinkDB
Position
6:1476436..1486713
AA seq 417 aa
MSENDTEKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYFQMT
LKGLAYCHKKWVLHRDMKPNNLLIASNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP
ELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGTSDIDQLGKIFQAFGTPTPSQWPDLV
YLPDYVEYQSVPAQPWRKLFPMATDDALDLLAKMFTYDPKVRISVEQALEHRYFSSAPLP
TEPAKLPRPAPKRESVNPRASDFHPLEGPTVLSPPRKARRVMPDREGFDGNAYQVDKIDE
HGEIRQAAGNYTGRNEQVPMSIDFSVFGSRPMSRPTINSADRSHLKRKLDLEFQHPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgtcagaaaacgacacagaaaagaaagttgctgataggtatctcaagcgtgaggtgctt
ggtgaaggtacttatggtgtcgtctacaaagccatcgatactaagactggacagacagtg
gctattaagaaaattcggcttgggaagcaaaaggagggggttaattttacagcacttcga
gagattaaactgcttaaagagcttaaagacccaaatataatcgagttgattgatgcattc
cctcacaaaggaaatttgcatcttgtcttcgagttcatggagactgatcttgaagcagtt
attcgtgaccgaaacatatttctttcaccagctgacataaaatcatactttcagatgaca
ttgaagggactggcttactgccacaagaaatgggttctccatagagatatgaagccaaac
aacttgttgatagcttctaatggacagcttaaacttgcagattttggtttggcacgaatt
tttgggagcccagatcgcaagttcactcaccaagtctttgctcgatggtatagagcgcct
gagctgttgtttggcaccaaacaatatggttctggggttgatgtttgggctgcagcctgt
atatttgctgaactcctccttcgccgaccatttctacagggaacaagtgatattgatcaa
ttagggaagatttttcaagcctttgggactccaacaccttctcagtggcctgatttggtc
taccttcctgattatgtggaataccaatctgttcctgcacaaccttggcgtaaattgttt
ccgatggctactgatgatgctttagatctgttggcaaagatgtttacttatgatccaaaa
gttagaatatcggttgaacaggcattagagcaccggtacttctcatctgcacctctgcct
acggagccggctaagctccctagacctgcccccaagcgggaatctgtcaatcctagagct
tcagatttccatccactggagggacccactgtgctatcacctccaaggaaggcaagaaga
gtgatgcctgaccgtgagggattcgatggaaatgcatatcaagttgataagattgatgag
catggtgaaatcagacaggcagctgggaattacactggcaggaatgaacaggtgccaatg
tcaatagatttttctgtttttggatcaagacctatgagcagaccgacaattaacagtgct
gacagatcccatctgaagaggaaactagatcttgaattccagcatccagaatag

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