Manihot esculenta (cassava): 110625075
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Entry
110625075 CDS
T05761
Name
(RefSeq) transcriptional activator DEMETER isoform X1
Organism
mesc
Manihot esculenta (cassava)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_DME
Perm-CXXC
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
110625075
NCBI-ProteinID:
XP_021626281
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All DBs
Position
10:6982567..6995478
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AA seq
1895 aa
AA seq
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MDPRINLGEGFSTQGREFEFMGSWVPATPKKPIQTRSNSMPIDRHGYHQLGTANWQEVAG
FPNGYVQEVSTIEQMGRNGSLAERKRMINHIAGSYTQSLSQEIGSWNCSSFVDLLTKDYA
APFACPDTSLSRSMSMGRPLIPDFHFQVTHLRESSSREMLFPNQPHCSSSNLSSGYNSLL
HASQYGFSMPCDPNFDINSQTSKGVNAASIATDSFQFAPKTPPLTKRLKNQLSAKYYEQE
KGSNEGIDKCHDLVTSVDYTPKQHTSDELLYNILDSSFAVISTPSEEPKDFGKQIDQVID
LNQTPQQKTQKRKKHRPKVVREGKQNRTPKASTTKIADLNMKTTEKRKYVRKKGQQESPA
QCPDSIGETTDSKETLNGRKNNVDHISERMNPSAGMAGPSCRRALNFDNLENIRDERESN
SVSQQEIMRKKEAFNSSTGFQAAESVDKTNMMHRTISDLQLRQHNELLLENQESAAISNL
TSSPSRLLCSNTSISHRTEAGAISVSDRREAAGLPASKKDAQMDNLNANARETDTRMQQH
LHADPERTRQLMPQDTQSVGEIPHHLIHGRGNKRGFGNVEQTSHCSASPPDYDSNSCIFS
AVCSETHKKMKIENGILTNTNGVLHSIAAVNYSIASTAQRNREIWNSYLNSKNIKRKENN
GSTRYPVDYYTNLVASGQDLSMQQIFSGPNLYMERIAEAKATHVETLASLTTVEKYNLLP
PTPKTGCQPEGQLQAKTSNIDVSMKQAMGNNQSKYASFREGKMLQEHADILKDQQSPAKR
RGRPSKQRFSTTIEEITYRMECLNLNAVGNEKTGNEQNALVPYKGDGTLIPYGGFDFIKK
RKPRPKVDLDPETERVWKLLMWKEGSEDVDGTDENKKQWWEEERRIFRGRADSFIARMHL
VQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPFKPARNRTSKRDGKII
LVEEPDACVLNPNDTVKWNEKFLHHSFYNQNSMANCESTEYQRETETSWTGRTSIVEVHS
HSPQEEVLSSQDSFDSSLIQSNGVRSYSGSNSEAEDLANGCIHSKHLDTHLTNLPQVEST
TLFEEFYGSVSGRSLFDIQSRHEQKQPEDMENRQQQWPRLERLDGSIKGPFTFYQQINYS
TPKMQVPDVSSSKCQLCTTVLSEILDIDSVDFNREESISSWPSSASRFNKEKYASCTSAR
VVQGAESIALSTAQQYGPWSYQETRTVDPHPFLSKQMTDQQSNTEPYLGSQPHKINKTFQ
LERKSTGETANLADAQVNGQSSYEQHLSNLPSLAGKVFDVEERIVLVDDKQTCTENGIIE
SNLEEQVHFTNKKNLKTSYLKARKVKAGDEKKDAIDWDSLRKQVLANAREKDRSQDTMDS
MDYEAMRCVSVDEISNTIKERGMNNLLAERIQEFLNRLVREHGSIDLEWLRDVPPDKAKD
YLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYP
VLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKNKPNCNACPMRAECRHFASAFA
SARLALPGPEEKIMVTSTVPLRTERSPGVVIDPMPLPPSEENSVRKGGSDIVTCVPIIEE
PATPEQEHNEVTESDIEDINNEDTDEIPTIKLNMEELTMNLQNYMQANMELQEGDMSKAL
VALNQEAASIPTPKLKNVSRLRTEHQVYELPDSHPLLKEMDKREPDDPSPYLLAIWIPGE
TANSIQPPEQHCQSQEPDKLCNEKTCFSCNSIREANSQTVRGTLLIPCRTAMRGSFPLNG
TYFQVNEVFADHETSLNPINVPRAWIWNLPRRTVYFGTSVSTIFKGLSTGGIQYCFWKGF
VCVRGFDQRTRAPRPLSARLHFPASKLAKTNKRTQ
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaggatcaatctgggagagggattttcaacccaagggagagaattcgagttt
atgggttcttgggtaccagcaactccgaaaaagcctattcaaacaagatctaattccatg
ccaattgacaggcatgggtatcatcaattgggcacagcgaattggcaagaagtggcagga
tttcccaatgggtatgtacaggaggtgtcgacgattgagcaaatgggtagaaatgggagt
ttggcagagaggaagagaatgataaatcacattgcagggtcctacacacagtcactgagt
caagagattgggagttggaattgtagttcatttgttgatcttttaacaaaggattatgca
gctccttttgcctgtccagatacaagtttaagtagaagtatgagcatgggaaggcctttg
attccagatttccatttccaggttacccacttgagagaatccagttcaagagaaatgcta
ttccccaaccagcctcactgctcaagttcaaacctgtcaagtggctacaatagcttactc
catgcatcacaatatggattttctatgccttgtgatcctaactttgacatcaattcacaa
acaagtaaaggagtcaatgctgcatcaattgcaaccgattcatttcaatttgcaccaaaa
acgccaccactgacaaagaggttgaagaaccagctctctgcaaaatattatgaacaggaa
aaaggctcaaatgaagggatagacaaatgccatgatttagtcacatccgtggactatact
ccgaaacagcacacttctgatgagctcttatacaacattctggactcatcatttgctgtc
atttctacaccatctgaggaaccaaaagattttggcaagcaaattgaccaagtcattgac
ctgaaccaaacaccccagcagaaaacacaaaaaagaaaaaagcacagacctaaagtagtc
agggaaggaaaacagaataggactcccaaggcttcaaccacaaaaatagctgatcttaac
atgaaaacaactgaaaagagaaagtatgtgcgcaaaaagggccaacaggaatcaccagct
caatgtccagattcaattggtgagactactgattcaaaggagacactgaatggaaggaag
aacaatgtagatcatattagtgaaagaatgaatccctctgctggaatggcaggaccttca
tgtagaagagcattgaattttgacaacttggaaaatatcagagatgaaagagagagcaat
tcagtttctcaacaggagataatgaggaaaaaagaggctttcaactcaagtacaggtttt
caagctgcagaatcagtcgataaaaccaacatgatgcacagaacaatatcagatttgcag
ttgagacaacacaatgagctactcctagaaaaccaggaatcagcagcaataagtaacctc
acctcttccccaagtcgattgctgtgtagcaacacctcaatttcgcacagaacagaagct
ggagccatttcagtttcagacagaagagaagctgcaggactaccagcttcaaaaaaagac
gcgcaaatggataatttaaatgccaatgctcgagaaacagataccagaatgcagcaacat
ctgcatgcagaccctgagaggaccagacaattgatgcctcaggatactcaatcagttgga
gagattccacatcatttaattcatggtaggggaaacaagagaggatttggtaatgttgaa
cagacaagccactgttctgcaagtccaccagattatgactcaaatagctgcatattcagt
gcagtttgttcagagacccataagaaaatgaagattgaaaatggaatcctaacaaataca
aatggtgtgctacattctattgcagctgtcaactattcaattgcatctacagcacaaagg
aatagggaaatatggaactcatacttgaacagcaagaatatcaaaaggaaagaaaataat
gggtccaccagataccctgttgactattacacaaatcttgtggcttctggacaagatttg
tcgatgcaacaaatcttttctgggcctaatttgtacatggaaaggattgcagaggccaaa
gccacacatgttgaaactcttgcctccctaaccacggttgagaagtataacctgctccca
ccaactcctaaaacaggctgtcaacctgaaggccaactacaagccaaaacttccaacatt
gatgtgtcaatgaagcaggcaatgggcaacaatcagtccaaatatgcttcattcagagaa
ggtaaaatgctacaagaacatgcggacatcctgaaagatcagcaatcacctgcaaaaaga
agagggcggccatcaaagcagagattttccactacaattgaagaaattacatatcgaatg
gaatgtctcaatctcaatgcagtaggcaatgaaaagacaggcaatgagcaaaatgcactt
gtgccatacaaaggagatggcaccctcattccatatggagggtttgattttatcaagaag
cgtaagccaaggcctaaagtagaccttgacccagagacagagcgagtgtggaaactgtta
atgtggaaggaaggaagtgaagatgttgatggaacagatgagaacaaaaagcagtggtgg
gaggaagaaaggagaatttttcgtggacgagctgattctttcattgcaagaatgcatctt
gtacaaggagataggcgcttctcaaaatggaagggatcagttgttgattcagtgatagga
gtcttccttactcaaaatgtttcagaccatctatccagctctgccttcatgtctctagca
gcaagatttccttttaagccagcaagaaacaggacctcaaagagagatgggaagataata
ttggttgaggaaccagacgcctgtgtgctaaacccaaatgacacagtcaaatggaatgaa
aagtttttacatcattccttctacaatcagaactctatggcaaactgtgaatcaacagaa
tatcagagagaaactgagacctcatggactggcaggacaagcattgtagaggttcacagt
cacagccctcaagaagaagttttgtcatctcaagattcttttgattcctcacttatccaa
agcaatggagtcagatcctactcaggctccaactcagaagcagaagatcttgcaaatggg
tgcatacacagcaagcatcttgatacacatttaacaaatcttccacaagttgagagcacc
accttgtttgaggagttctatggtagtgtcagtggaagatcactgtttgatatacaatcc
aggcatgaacaaaagcaacctgaagatatggaaaacaggcagcagcaatggccaagactg
gagagattagatggtagcataaaaggcccttttacgttttatcagcaaatcaattacagt
actccgaagatgcaagtaccagatgtttcttctagtaagtgtcaactgtgcacaactgta
ctatctgagatccttgacatagacagtgttgattttaacagagaagaaagcatatcttct
tggccttcaagtgcctccagattcaacaaggaaaaatatgcaagctgcacaagtgcaagg
gttgtacagggggcagagagtatagctttatccacagcacaacaatatgggccatggagc
tatcaagaaacccggacagttgacccacatcctttcctaagcaagcaaatgacagatcaa
caaagcaacactgaaccttaccttggcagtcaaccacataagataaacaagaccttccag
ttggaaagaaaatcaacaggtgagactgccaatcttgctgatgcacaggttaacgggcag
agtagttatgagcaacacctctcaaaccttcccagtctcgcaggaaaagtttttgatgtt
gaagaaagaattgttttggtggatgataagcaaacatgcactgaaaatggaatcattgaa
tcaaatttggaggagcaagtgcattttactaataaaaaaaacttaaaaacaagttatttg
aaagcaagaaaagtgaaagctggagatgagaaaaaggatgcaattgactgggatagttta
aggaagcaggttctggcgaatgctagagaaaaagacagaagccaagatacaatggactcc
atggactatgaagcgatgagatgtgttagtgttgatgagatttctaatactattaaagaa
agagggatgaacaacttgctagcagaacgaatccaggaatttctgaaccgactggtcaga
gaacatggaagcattgatctcgaatggttaagagatgtccctcctgacaaagcaaaggat
tatctgctaagtataaggggattgggtttgaaaagtgtggaatgtgtgcgccttttaaca
cttcatcatcttgctttccctgttgacacaaatgttggacgcatagcagttcgattgggc
tgggtccctcttcaaccactgccagagtcactgcaattgcacctccttgaactgtaccca
gtactcgagtcaattcagaaatacctctggccaagattgtgcaaacttgatcagagaaca
ttgtatgaattacattaccagctgataacatttggaaaggttttttgtacgaagaataaa
ccaaattgcaatgcatgtccaatgagagcagagtgcaggcattttgctagcgcctttgca
agtgcaaggcttgcactacctgggccagaagagaagattatggtgacttcaactgttcct
ttaagaacagagagaagccctggcgtagttattgatcctatgccattacctccatctgag
gagaactcagttagaaaaggaggatcagatattgttacttgtgtgcctatcattgaagag
ccagcaacacctgaacaagaacacaatgaagtaacagaaagtgatatagaggacataaac
aatgaagatactgatgaaataccgactataaaactcaacatggaagagttgacgatgaat
ctacagaattacatgcaagcaaacatggaacttcaagaaggtgacatgtccaaggcttta
gttgctttgaatcaagaagctgcctccattcccacacccaaactaaagaatgtcagtcgg
ctacggacagagcaccaagtatatgaacttccagattcacatcctctcctgaaagagatg
gataaaagagaacccgatgatcccagtccataccttcttgcaatatggattccaggtgaa
actgcaaattcgattcagccaccagaacaacattgtcaatcccaggaaccagacaaatta
tgcaacgaaaagacatgcttttcatgcaacagtatcagagaagctaattcacaaacagtc
agaggaacacttctgataccttgtagaacagcaatgcgaggaagctttccactcaacggc
acctattttcaagtgaatgaggtatttgcagatcatgagactagcctcaacccgatcaat
gttccaagagcatggatatggaatttgccaagacgaacagtgtactttggaacctctgta
tcaacaatatttaaaggactttcaactggaggaattcaatactgcttttggaaaggattt
gtttgtgtgcgagggtttgaccaaagaacgagagcacccagacctcttagtgctcgattg
cactttccagcaagcaagctagcgaagacaaataaaagaacacaataa
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integrated database retrieval system
