Manihot esculenta (cassava): 110627269
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Entry
110627269 CDS
T05761
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
mesc
Manihot esculenta (cassava)
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mesc01002
]
110627269
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mesc04131
]
110627269
04121 Ubiquitin system [BR:
mesc04121
]
110627269
Enzymes [BR:
mesc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110627269
Peptidases and inhibitors [BR:
mesc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110627269
Membrane trafficking [BR:
mesc04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110627269
Ubiquitin system [BR:
mesc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110627269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110627269
NCBI-ProteinID:
XP_021629208
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All DBs
Position
12:complement(35227927..35238918)
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AA seq
559 aa
AA seq
DB search
MDSVICNLKHGCKSLSHVKWVSASGFHISVAGVLGVTGLLLALIRDRNLGNLTRLPWLAR
RENRLEKLYFVPGLQNLGNNCFLNVILQALASCSYFQPFLQKAIEDLESSAIGEWGENLH
LTVALAALLEELSAFGEQRVVLSPRKVMLAMSDYIQNFSLTSQQDAEEAFLHLLSSLREE
FLDSYPPKESSLADAFASSNYRILAPRRGEILNEQERWQQHLFGPFDGILSSILTCQSCS
SQISLNFQFFHSLPLLPMLESSSTIMAGCTLEECLKQFIVAEQVENYNCSHCWHIAAMKF
LSLKGAKERDIEEIRRCSMQDSCTCHSLSHLENIPWSNNFSRTLKQLSIARCPKILCLHL
QRVSVNHFGELVKLQGHVRFPLILNMLPFTLEKAQCQKARPHLNHFNVQSDTRMLNCTFG
QSTYSKVVAVDGSGFNGHVETFLGESGLPKIKGCSKAICTDVSLQTNDKVGVACSVAPTA
PFLYRLVSVVEHFGKAGGGHYTVYRSASSQTLKESTSENLEPAHLQWFCISDSDVSIVSE
EDVLAAEASLLFYERIVDV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggactcagtaatctgcaatctcaagcatgggtgcaaatctttgtctcatgtgaagtgg
gtttcagcttctgggtttcacatatcggtggctggtgttctgggtgttactggtttgctt
ttggctttaataagagaccgcaacttagggaatttaactcgtttaccttggttggctcgg
agagaaaatcgtctggagaagctctacttcgttcctggcttgcaaaatcttgggaataat
tgctttttgaatgtcatattacaggctctagctagctgttcatatttccaaccttttctt
caaaaggcaatagaagatttggaatcatctgccattggagagtggggtgaaaatttacac
cttacagttgctttggctgctttactagaagaactatctgcatttggtgaacagagagtg
gttttaagtccgaggaaggtgatgcttgcaatgtctgactatattcaaaatttcagttta
acaagccaacaggatgctgaagaagcatttcttcatctgttgtcatctttaagagaagaa
tttttagattcttaccctccaaaggagagttctctagcagatgcttttgcttcttctaac
tataggattcttgctccaaggaggggagaaatactgaatgaacaagaaaggtggcaacag
cacttatttggaccatttgatgggattcttagtagcattttaacttgtcaaagttgttca
tctcagatttcattgaattttcaattttttcatagcttacctcttctgccaatgcttgaa
agcagttctaccattatggctggatgtaccttagaggagtgcttgaagcagttcattgtt
gctgaacaagttgagaattacaactgcagccattgttggcacattgctgcaatgaagttt
ttgtccttaaaaggagcgaaagagagagacattgaagaaattaggagatgcagtatgcaa
gattcctgtacctgccacagtctttctcatcttgaaaatataccatggtcaaataacttt
tcacgcactctaaagcaactaagtattgctcgttgcccaaagattttatgccttcatcta
cagcgtgtttcagtaaaccactttggagaactagtcaaacttcagggccatgtccggttt
ccattaattttgaacatgcttccattcactttggaaaaggcacaatgtcaaaaagcaagg
cctcatttgaatcattttaatgtgcaatcagacacaagaatgctaaattgtacttttggg
caaagtacctactcaaaggttgtagcagttgatgggtctgggttcaatggacatgtagaa
accttcttgggagaatctggtttgcccaaaatcaaaggctgttccaaagccatatgtact
gatgtgagcttgcaaactaatgacaaggtcggtgtagcttgctcagtagctcctacagca
ccttttctatatcgacttgtttctgttgtagagcacttcgggaaggccgggggtggccat
tatactgtttacagaagtgcaagttcccagacactgaaagaatctaccagtgaaaatctc
gagcctgcccatctgcagtggttttgtatatcggactctgatgtatccattgtttcagag
gaagatgttctagctgcggaggctagcttgcttttctatgagaggattgtagatgtctga
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