Manihot esculenta (cassava): 110630232
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Entry
110630232 CDS
T05761
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
mesc
Manihot esculenta (cassava)
Pathway
mesc04120
Ubiquitin mediated proteolysis
mesc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mesc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110630232
04120 Ubiquitin mediated proteolysis
110630232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mesc03110
]
110630232
04131 Membrane trafficking [BR:
mesc04131
]
110630232
04121 Ubiquitin system [BR:
mesc04121
]
110630232
Enzymes [BR:
mesc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110630232
Chaperones and folding catalysts [BR:
mesc03110
]
Other chaperones and cochaperones
Others
110630232
Membrane trafficking [BR:
mesc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110630232
Ubiquitin system [BR:
mesc04121
]
Ubiquitin ligases (E3)
U-box type E3
110630232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_2
TPR_1
TPR_11
TPR_17
TPR_16
TPR_8
TPR_14
zf-NOSIP
ANAPC3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110630232
NCBI-ProteinID:
XP_021633313
LinkDB
All DBs
Position
13:complement(6139396..6145886)
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AA seq
282 aa
AA seq
DB search
MGPGAAFTAAAARQAEVLRTDGNTFFGKHRYGAAIDAYTEAIALCPNVPVYWTNRALCHR
RRNDWTKVEEDSRKAIELDYNSVKAHYMLGLALLQKNELAGGVKELQRALDLGRGANPVG
YMVEEIWQELAKAKYMQWEQSSTKRSWELQSLKEACENALEEKHFLDSCQTEGFLDEMNV
PHLKQFEDLGQVFKRAAEDDTPTEVPDYLCCRITLDIFRDPVITPSGVSYERAVILNHLQ
KVGKFDPVTREPLDPSQLIPNFAIKEAVQAYLNKHGWAYKIE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctggagctgcattcactgcggcggccgctagacaagctgaagtattgaggact
gatggcaacacctttttcggaaagcacagatatggagccgccattgatgcttatactgag
gcaattgctttgtgccctaatgttccggtatattggacgaatcgcgctctctgtcatcgg
agacggaatgattggactaaagttgaagaggattctcgtaaagcgattgaacttgactac
aattccgtcaaggcacactatatgttaggacttgccttactacagaagaatgagttagct
ggaggagtaaaggaattacaaagggctcttgatcttggtaggggtgccaacccagtgggt
tatatggtagaagagatctggcaagagcttgcaaaagcaaaatatatgcaatgggagcaa
tcatccactaagcgatcatgggaactgcaaagcttgaaagaagcctgtgagaatgcactg
gaggaaaaacatttccttgatagttgtcaaacagaaggattcttggatgagatgaatgtt
ccccatttgaaacaatttgaggatttaggacaagtttttaaaagagccgcagaagatgat
acgccaaccgaggtgccggattacctgtgttgtagaattacacttgatatattccgagat
cctgtcattacacccagtggggtttcgtatgaaagagcagtgatccttaaccatcttcag
aaggtgggaaagtttgatccagtgactcgagaaccacttgatccgtcacagctcattccg
aactttgcaataaaggaagcagtccaagcatatcttaacaaacatggttgggcttacaag
atagaatga
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