Methylobacterium sp. AMS5: Y590_04045
Help
Entry
Y590_04045 CDS
T04283
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
meta
Methylobacterium sp. AMS5
Pathway
meta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Y590_04045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meta03400
]
Y590_04045
Enzymes [BR:
meta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Y590_04045
DNA repair and recombination proteins [BR:
meta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Y590_04045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_4
AAA_22
PIF1
Helicase_RecD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMB44056
LinkDB
All DBs
Position
complement(818366..820603)
Genome browser
AA seq
745 aa
AA seq
DB search
MIDVAVETIVSRRDWGVIFSATVLTKGHADHGRRIRVRASISAMSDAPEVGETWAIDGEV
LDTAYGRQVDAEAARRVMPDGALVRGYLAFNVPGIGRDRASRLWDAFGDTLGTVLSDERN
IPRIAEVIAPDRPLLALRIAAATVAAWRAAASEAAAMAWMDGHGVSNLAVARRVVRILGD
EAVGILADNPYILVPLLPWKNVDALGRRLLPTIGATGWDVRRFVGAADETVKRALARGDT
VMAPEHVRLSLGRLLKTDRAEVIEDAVQAAERNGALVCVEEGYRAPGAALMEDHVVRRLR
SLVFSHAASPVRLLSPSGIAELVADVTPVGRPLHSQQTDAVLRILCLPVACLTGGGGTGK
TYTCKVLCDAWERLGGEVLPCALAGKAALRLSRSTRRLARTLARTLGELDERDRLDRVID
DPEADEKTRSAASRKRETLARIATSTLVLIDEASMVDLPTVHAIVRRMPDGARLLLVGDP
AQLPPVGFGLVFHRLVADDGITSHLTHVHRQAAETGIPVAAAQVRSRCMPIFERYAGVQD
GVSFVAVEGAAFPGTVERVALELGILEGGSIIVTATNDGEAGVKSLNEMLHDRHAERTGN
EPMRGVLGRFFSAGAPVIFGRNDYRLGLFNGMLGRVTRTFPDDRALEVIFEGESDCRRLT
EEHLVDLDLAYAVTCHKCQGSSAPRVVVPIYQSRVLDPSWLYTALTRGERQVVFVGESKV
FRDSLALPFAAERRQVGLRWAELVA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgtcgccgtcgagaccatcgtctcgcgccgggattggggcgtcatcttttcg
gcaacggtactgacgaaagggcatgccgaccacggtcgcaggatacgagtacgggcgtcc
atcagcgccatgtcggacgcccccgaggtcggggagacctgggccatcgacggtgaggtt
ttggatacggcatacggccgacaggtcgatgccgaggccgcccgccgcgtgatgccggac
ggagcgctcgtcagggggtacttggcgttcaacgttccgggtatcggaagggatcgtgcg
agccgcctgtgggatgccttcggcgataccttgggcaccgtactgtccgacgagcggaac
atcccacgcatcgccgaagtgatcgcccctgaccggccgcttctggcgctacggatcgct
gctgccaccgtcgcggcatggcgagcggccgcctccgaggccgccgccatggcctggatg
gatggtcatggcgtttcgaacctagcagttgccaggcgggtcgtccggatcctcggcgac
gaggcggtcgggattctcgcggacaacccgtacatcctcgtgcccctcctaccttggaag
aacgtcgacgcccttggaaggcggctcctgcccaccatcggggcgacggggtgggacgtc
cggcggttcgtcggggcggccgacgaaaccgtgaagcgggccctcgcccgcggcgatacg
gtcatggccccggagcacgtccggctctccctgggacgtttgctcaagacggatcgtgcc
gaagtcattgaggacgcggtccaggccgcggaacggaacggcgccctcgtgtgtgtggag
gaaggctaccgggccccgggagccgccttgatggaagatcacgtcgttcggcgcctcaga
tccttggtgttctcgcacgcggcttcgccggtgagacttctgtcgccgagcggcatcgcc
gaactggtcgccgatgtcactccggtcggccggccgctgcattcgcaacagacggacgca
gtgcttcgcatcctatgcttaccggtggcatgcctcaccggtgggggcgggaccggtaag
acgtacacctgcaaggtcttgtgtgacgcgtgggagcgtcttggcggagaggtgctacct
tgcgctctcgccggaaaagccgcgttgcggttgtcccgatccacccgccgccttgcgagg
acgctggcgcgcacgctcggcgagctcgacgagcgggaccggctggatcgggtcatcgac
gatcccgaagctgacgagaagacgcgctccgctgcgagccgcaagcgggagaccttggcg
cggatcgctacctcgacgctggtcctgatcgacgaggcctcgatggtcgatctgccgaca
gtgcatgcgattgttcgccggatgcccgatggtgcgcgccttctgctggtcggggaccct
gctcagttgcctccagtgggcttcgggctggtcttccaccgcctagtcgccgacgacgga
atcacgtcccacctcacgcacgtacaccgccaagccgcggagacgggtatccctgtggcg
gccgcgcaggtgcgtagcagatgcatgccgatcttcgagcgttacgccggggtgcaggat
ggagtgtctttcgttgcggttgagggggctgcgttcccgggcaccgtggagcgagtggcg
ctcgaactgggcattcttgaggggggctcgatcatcgtgaccgcaacaaacgatggtgag
gccggggtcaaatccctcaacgaaatgctccacgaccggcatgccgaacggacagggaat
gagcccatgcgtggagtcctgggacggttcttctcggcgggcgcacctgtcattttcggg
cggaacgactatcggttggggctcttcaacggcatgctcggacgcgtgacgcggacgttc
ccggacgatcgcgcgctggaggtgatattcgagggtgagagcgattgcaggcgactgacg
gaggagcacctcgtcgatctggacctcgcctacgccgttacgtgtcacaagtgccaggga
tccagcgcgccccgtgttgtcgtcccgatttaccaaagtcgcgtacttgacccgtcctgg
ctctacaccgcgttgacgaggggcgagcgtcaggtggtgttcgtcggagaatccaaggtc
tttcgggattccctggccctgccgttcgctgccgagaggcggcaggttggcctgcgttgg
gcggagcttgtggcatga
DBGET
integrated database retrieval system
