Methylobacterium sp. AMS5: Y590_11895
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Entry
Y590_11895 CDS
T04283
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
meta
Methylobacterium sp. AMS5
Brite
KEGG Orthology (KO) [BR:
meta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meta03016
]
Y590_11895
Enzymes [BR:
meta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Y590_11895
Transfer RNA biogenesis [BR:
meta03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Y590_11895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AMB45609
LinkDB
All DBs
Position
2581090..2581719
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AA seq
209 aa
AA seq
DB search
MAAAPARIRLHHGDLPPDFEPGAAIAIDTETLGLNPHRDRLCVVQVSRGDGSADVVQIRP
GDPAPERLMAVLADAGVVKIFHFARFDLAVLFNAFGVMPAPVYCTKIASKLARTYTDRHG
LKDVVRELVGVDLSKQQQSSDWGAGSLSQAQIDYAASDVLYLHAARERLDAMLARESRTE
MAQACFDFLPTRSKLDLAGWPEVDIFAHA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcccctgcccggatccgcctccaccacggcgacctgccgcccgatttcgag
ccgggcgcggcgatcgcgatcgacaccgagacgctggggctcaacccgcatcgcgatcgg
ctctgcgtcgtgcaggtgtcccgcggcgacggcagcgccgatgtggtgcagatccggccc
ggcgacccggcaccggagcggctcatggcggtcctggccgatgccggcgtcgtcaagatc
ttccacttcgcccggttcgatctcgcggtgctgttcaacgcgttcggcgtcatgccggct
ccggtctactgcacgaagatcgcctcgaagctcgcccgcacctacaccgaccgtcacggc
ctcaaggacgttgtgcgcgaactcgtgggcgtcgatctctccaagcagcagcaatcgtcc
gattggggcgccgggagcttgagccaggcgcagatcgactacgctgcgtccgacgtgctc
tacctgcatgccgcccgcgagcgtctcgatgccatgctggcccgcgaaagccgcaccgag
atggcgcaggcctgtttcgatttccttccgacccgatccaagctcgatctcgccggctgg
ccggaggtcgacatcttcgcccacgcctga
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